Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., proline:sodium symporter PutP from Pseudomonas simiae WCS417

 Score =  111 bits (277), Expect = 7e-29
 Identities = 115/484 (23%), Positives = 201/484 (41%), Gaps = 50/484 (10%)

Query: 2   VTYSTFIVIAIYLILTILISWFVNQRSIGNTDFSTGGRQFGWFTAGVSILATYISAMTFI 61
           V+  T I   IY+   +LI +   + +   +D+  GGR  G     +S  A+ +S    +
Sbjct: 3   VSNPTLITFVIYIAAMVLIGFMAYRSTNNLSDYILGGRSLGSVVTALSAGASDMSGWLLM 62

Query: 62  GMPGWVYQSGMEA--------LNIHLNYPIVIFFAVVFFIPVFYRMGFTSIYEYLEHRF- 112
           G+PG +Y SG+          +  +LN+   +F A    +   +     ++ +Y   RF 
Sbjct: 63  GLPGAIYMSGLSESWIAIGLIVGAYLNW---LFVAGRLRVQTEHNGDALTLPDYFSSRFE 119

Query: 113 --GVYARTINSVVFILVQCISSGVILYAIALILIQILPISIVEAIVYITLFTACYTYAGG 170
                 R I++VV ++   I     + A A +      +S   A+      T  YT+ GG
Sbjct: 120 DKSGLLRIISAVVILVFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATIAYTFVGG 179

Query: 171 ISTVIWTDMLQSAVLIAGSVAIFVLLLLQVDGVHGVSREQLNIINLQFDLGVDTTLWAGV 230
              V WTD +Q+ ++I   +   +++LL   GV              FD+  +TT + G+
Sbjct: 180 FLAVSWTDTVQATLMIFALILTPIIVLLATGGVDTTFLAIEAKDPTNFDMLKNTT-FIGI 238

Query: 231 VAVSFLHMSVYGTNQLIIQRTLATRCEKTAQKS-------MLLCGYGAFFIYFFFALLGV 283
           +++    +  +G    I+ R +A    K+  K+       M+LC  G   + FF      
Sbjct: 239 ISLMGWGLGYFGQPH-ILARFMAADSVKSIAKARRISMTWMILCLGGTVAVGFF------ 291

Query: 284 LLSIFYQERH-------FTNSNEVILDFVFHHTNPWVIGLIISALAAAAMSTLDSTYNSM 336
              I Y   H         N   V ++      NPW+ G+++SA+ AA MSTL       
Sbjct: 292 --GIAYFSAHPEVAGPVNENHERVFIELAKLLFNPWIAGVLLSAILAAVMSTLSCQLLVC 349

Query: 337 ATVATFDLYQRFIRRNAPDHHYQAVARKMSLVAAGLVVIPALLAVSNESVLKTIASLTSI 396
           ++  T D Y+ F+R+NA       V R M L+ A   +I   +A + E+ +  + S    
Sbjct: 350 SSALTEDFYKTFLRKNASQVELVWVGRLMVLLVA---LIAIAMAANPENRVLGLVSYAWA 406

Query: 397 FVGIRLGSFVL-GLFSNQANEKGVIAGSIISIAAVLGARLMDIAWPWFAPIGTVFFLVSG 455
             G   G  VL  +        G +AG ++    V       I W  F  +G ++ ++ G
Sbjct: 407 GFGAAFGPVVLISVIWKGMTRNGALAGILVGAITV-------IVWKHFELLG-LYEIIPG 458

Query: 456 VVIS 459
            + +
Sbjct: 459 FIFA 462