Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., sodium-solute symporter, putative from Variovorax sp. SCN45

 Score = 84.0 bits (206), Expect = 1e-20
 Identities = 88/433 (20%), Positives = 182/433 (42%), Gaps = 15/433 (3%)

Query: 9   VIAIYLILTILISWFVNQRSIGNTDFSTGGRQFGWFTAGVSILATYISAMTFIGMPGWVY 68
           ++ +YL++TI I  +  +R    TDF+  GR    F    +  AT+  + T +G+P    
Sbjct: 5   LVIVYLLVTIAIGLYAAKRVKNTTDFAIAGRHLPLFMIVTTTFATWFGSETVLGIPAKFI 64

Query: 69  QSGME-ALNIHLNYPIVIFFAVVFFIPVFYRMGFTSIYEYLEHRFGVYARTINSVVFIL- 126
           + G+   +         +    +FF    YRM   +I +Y   R+G       S++ +L 
Sbjct: 65  EGGLNGVVEDPFGAGTCLILVGLFFAGKLYRMTLLTISDYYRERYGRTVEVACSLIIMLS 124

Query: 127 -VQCISSGVILYAIALILIQILPISIVEAIVYITLFTACYTYAGGISTVIWTDMLQSAVL 185
            +  +S+ V    +   L+    ISI   +V   +    YT  GG+ +V  TD +Q  +L
Sbjct: 125 YLGWVSAQVTALGLVFNLLSAGVISIPMGMVIGVISILAYTLFGGMWSVAVTDFIQMIIL 184

Query: 186 IAGSVAIFVLLLLQVDGVHGVSREQLNIINLQF--DLGVDTTLWAGVVAVSFLHMSVYGT 243
           +AG   I +       G   V    ++    +F  +      ++    A++ +  S+   
Sbjct: 185 VAGLAVIAMFAGSMAGGADKVVAFAVSKDLFKFWPEPSWHDMVFFFAAAITMMLGSI--P 242

Query: 244 NQLIIQRTLATRCEKTAQKSMLLCGYGAFFIYFF---FALLGVLLSIFYQERHFTNSN-E 299
            Q + QR ++    K A +  ++ G  A+ ++ F   F +   LL +  Q       + +
Sbjct: 243 QQDVFQRVMSANSVKAATRGPVIGGL-AYILFAFVPMFLVASALLIMPEQTATLLKEDPQ 301

Query: 300 VILDFVFHHTNPWVIG-LIISALAAAAMSTLDSTYNSMATVATFDLYQRFIRRNAPDHHY 358
            +L  +     P+V+  L   AL +A  ST  +T  + +   T +++++F  R A     
Sbjct: 302 KVLPTLVLQKMPFVMQVLFFGALLSAIKSTASATLLAPSVTFTENIWRQF--RPAGTDRQ 359

Query: 359 QAVARKMSLVAAGLVVIPALLAVSNESVLKTIASLTSIFVGIRLGSFVLGLFSNQANEKG 418
             +  +++++     V+   + +    + + ++    + +       V GL+  +A  +G
Sbjct: 360 NLMTMRITVLLFSAAVLAYAIRMQGTPIYELVSGAYQVPLVGAFVPLVCGLYWRRATTQG 419

Query: 419 VIAGSIISIAAVL 431
            +A  ++ I   L
Sbjct: 420 AVASIVLGIGVWL 432