Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 552 a.a., acetate permease from Pseudomonas putida KT2440

 Score = 88.6 bits (218), Expect = 5e-22
 Identities = 99/445 (22%), Positives = 190/445 (42%), Gaps = 31/445 (6%)

Query: 12  IYLILTILISWFVNQRSIGNTDF-STGGRQFGWFTAGVSILATYISAMTFIGMPGWVYQS 70
           ++++ T+ I+W+  +R+   TDF S GG   GW   G+++   Y+SA T +G+   +Y S
Sbjct: 40  VFVLFTLCITWWAARRTRSTTDFYSAGGGIQGW-QNGLALAGDYMSASTLLGITALIYTS 98

Query: 71  GMEA----LNIHLNYPIVIFFAVVFFIPVFYRMGFTSIYEYLEHRFGVYARTINSVVFIL 126
           GM+     +     +P+++   +   +    R  F  I  Y   +  V  RT+ ++  + 
Sbjct: 99  GMDGYIYLIAFFAGWPVLLLL-MTERLRNLGRFTFADITSYRLDQGKV--RTMAAIGSLT 155

Query: 127 VQCISSGVILYAIALILIQILPISIVEAIVYITLFTACYTYAGGISTVIWTDMLQSAVLI 186
           V C      +     ++  +  +    A+V +      Y   GG+    W  ++++ +L+
Sbjct: 156 VVCFYLVAQMVGAGQLIRLLFGLDYHIAVVIVGALMMLYVTFGGMVATTWVQIIKAFLLL 215

Query: 187 AGSVAIFVLLLLQVDGVHG--VSREQLNIINLQFDLGVDTTLWAGVVAVSFLHMSVYGTN 244
            G   +  L + + D  +   VS+        +  L   + L   + A+S     V+GT 
Sbjct: 216 VGGSLVLFLAMREFDFSYDALVSKAMDTHALGERLLAPGSLLADPLTALSLSLGLVFGTA 275

Query: 245 QL--IIQRTLATRCEKTAQKSMLLCGYGAFFIYFFFALLGVL----LSIFYQERHFTNSN 298
            L  I+ R       + A+KS+L   Y   FI +FF ++ +L    + I  Q+  F    
Sbjct: 276 GLPHILMRFFTVSDAREARKSVL---YATGFIGYFFNVIFLLGLASIVIVSQQPKFFEGG 332

Query: 299 EV---IL---DFVFHHTNPWVIG-LIISALAAAAMSTLDSTYNSM----ATVATFDLYQR 347
           EV   +L   + V  H    V G L++  L+A   +T+ +  + +    A+    DLY R
Sbjct: 333 EVGGKLLGGGNMVVMHLAQAVGGNLLLGFLSAVTFATILAVVSGLALAGASAIAHDLYAR 392

Query: 348 FIRRNAPDHHYQAVARKMSLVAAGLVVIPALLAVSNESVLKTIASLTSIFVGIRLGSFVL 407
            I + A     +    K++ ++ GLV I   +   N +V   +A    I          L
Sbjct: 393 VIMKGAASEAQELRVTKLATLSLGLVAIALGILFENINVAFMVALAFGIAASANFPVLFL 452

Query: 408 GLFSNQANEKGVIAGSIISIAAVLG 432
            +F +    +G +A   + + + +G
Sbjct: 453 SMFWSGLTTRGALAAGYVGLLSAMG 477