Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., sodium/proline symporter PutP from Pseudomonas fluorescens SBW25

 Score =  111 bits (278), Expect = 5e-29
 Identities = 114/485 (23%), Positives = 201/485 (41%), Gaps = 52/485 (10%)

Query: 2   VTYSTFIVIAIYLILTILISWFVNQRSIGNTDFSTGGRQFGWFTAGVSILATYISAMTFI 61
           V+  T I   IY+   +LI +   + +   +D+  GGR  G     +S  A+ +S    +
Sbjct: 3   VSNPTLITFVIYIAAMVLIGFMAYRSTNNLSDYILGGRSLGSVVTALSAGASDMSGWLLM 62

Query: 62  GMPGWVYQSGMEA--------LNIHLNYPIVIFFAVVFFIPVFYRMGFTSIYEYLEHRF- 112
           G+PG +Y SG+          +  +LN+   +F A    +   +     ++ +Y   RF 
Sbjct: 63  GLPGAIYMSGLSESWIAIGLIVGAYLNW---LFVAGRLRVQTEHNGDALTLPDYFSSRFE 119

Query: 113 --GVYARTINSVVFILVQCISSGVILYAIALILIQILPISIVEAIVYITLFTACYTYAGG 170
                 R I++VV ++   I     + A A +      +S   A+      T  YT+ GG
Sbjct: 120 DKSGLLRIISAVVILVFFTIYCASGIVAGARLFESTFGMSYETALWAGAAATIAYTFVGG 179

Query: 171 ISTVIWTDMLQSAVLIAGSVAIFVLLLLQVDGVHG--VSREQLNIINLQFDLGVDTTLWA 228
              V WTD +Q+ ++I   +   +++LL   GV    ++ E  N  N      +  T + 
Sbjct: 180 FLAVSWTDTVQATLMIFALILTPIIVLLATGGVDTTFLAIEAKNPDNFNM---LKNTTFI 236

Query: 229 GVVAVSFLHMSVYGTNQLIIQRTLATRCEKTAQKS------MLLCGYGAFFIYFFFALLG 282
           G++++    +  +G   ++ +   A   +  A         M+LC  G   + FF     
Sbjct: 237 GIISLMGWGLGYFGQPHILARFMAADSVKSIANARRISMTWMILCLGGTVAVGFF----- 291

Query: 283 VLLSIFYQERH-------FTNSNEVILDFVFHHTNPWVIGLIISALAAAAMSTLDSTYNS 335
               I Y   H         N   V ++      NPW+ G+++SA+ AA MSTL      
Sbjct: 292 ---GIAYFSAHPEVAGPVTENHERVFIELAKLLFNPWIAGVLLSAILAAVMSTLSCQLLV 348

Query: 336 MATVATFDLYQRFIRRNAPDHHYQAVARKMSLVAAGLVVIPALLAVSNESVLKTIASLTS 395
            ++  T D Y+ F+R+NA       V R M L+ A + +  A+ A  N  VL  ++   +
Sbjct: 349 CSSALTEDFYKTFLRKNASQVELVWVGRLMVLLVALIAI--AMAANPNNRVLGLVSYAWA 406

Query: 396 IFVGIRLGSFVL-GLFSNQANEKGVIAGSIISIAAVLGARLMDIAWPWFAPIGTVFFLVS 454
            F G   G  VL  +        G +AG ++    V       I W  F  +G ++ ++ 
Sbjct: 407 GF-GAAFGPVVLISVIWKHMTRNGALAGILVGAITV-------IVWKHFELLG-LYEIIP 457

Query: 455 GVVIS 459
           G + +
Sbjct: 458 GFIFA 462