Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., Predicted sialic acid transporter from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  187 bits (474), Expect = 1e-51
 Identities = 132/482 (27%), Positives = 241/482 (50%), Gaps = 28/482 (5%)

Query: 1   MVTYS----TFIVIAIYLILTILISWFVNQRSIGNTDFSTGGRQFGWFTAGVSILATYIS 56
           M+T+S     ++V+  YL+  +L+  + ++R     D+  GG +   + AGVS+ AT +S
Sbjct: 1   MITHSFGIVNYLVLFGYLLAMMLVGVYFSRRQKTADDYFRGGGRVPGWAAGVSVFATTLS 60

Query: 57  AMTFIGMPGWVYQSGMEALNIHLNYPIVIFFAVVFFIPVFYRMGFTSIYEYLEHRFGVYA 116
           ++TF+ +P   + S    +        ++     F+IP F ++  TS YEYLE RF V  
Sbjct: 61  SITFMSIPAKAFTSDWTFIIGQYLAIAILPLVFYFYIPFFRKLKVTSAYEYLEARFDVRC 120

Query: 117 RTINSVVFILVQCISSGVILYAIALILIQILPISIVEAIVYITLFTACYTYAGGISTVIW 176
           R   S+ F+L       +I +   L L   + I  V  ++ I++    YT+ GGI  VIW
Sbjct: 121 RLFASMSFMLFHIGRIAIITFLTVLALRPFIAIDPVILVLLISVMCIIYTWMGGIEGVIW 180

Query: 177 TDMLQSAVLIAGSVAIFVLLLLQVDGVHGVSREQLNIINLQFD----------LGVDTTL 226
           TD++Q  +L   ++ IF+++ L+V G  G+  +++  +  Q D             ++T+
Sbjct: 181 TDVIQGLLLSGSAILIFIVICLKVQG--GI--DEIFTVTQQADKFFPATQFHWSWTESTV 236

Query: 227 WAGVVAVSFLHMSVYGTNQLIIQRTLATRCEKTAQKSMLLCGYGAFFIYFFFALLGVLLS 286
              ++   F ++  +  +Q ++QR + T   +  +K++L        I  FF  +G  L 
Sbjct: 237 PVLMIGFLFANIQQFTASQDVVQRYIVTDSIEETKKTLLTNAKLVAVIPVFFFAIGSALF 296

Query: 287 IFYQERHFT-----NSNEVILDFVFHHTNPWVIGLIISALAAAAMSTLDSTYNSMATVAT 341
           ++YQ+         N+  ++  FV       + GLII+A+ AAA S++ S+ NS+++   
Sbjct: 297 VYYQQHPQLLPAGFNTGGILPLFVVTEMPVGIAGLIIAAIFAAAQSSISSSLNSISSCFN 356

Query: 342 FDLYQRFIRRNAPDHHYQAVARKMSLVAAGLVVIPA---LLAVSNESVLKTIASLTSIFV 398
            D+YQR   +     +   +A K+ ++ AGL+   A   L+      +     SL  +  
Sbjct: 357 SDIYQRLSHKKRTPENRMKIA-KLVILVAGLISSAASVWLVMADESEIWDAFNSLIGLMG 415

Query: 399 GIRLGSFVLGLFSNQANEKGVIAGSIISIAAVLGAR-LMDIAWPWFAPIGTVFFLVSGVV 457
           G   G F+LG+F  +AN    + G IIS+  VLGAR   D+ + ++  IG++  ++SGV+
Sbjct: 416 GPMTGLFMLGIFFKRANAGSAVLGIIISVITVLGARYATDLNFFFYGVIGSLSVVISGVI 475

Query: 458 IS 459
            +
Sbjct: 476 FA 477