Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., sodium/pantothenate symporter (VIMSS) from Escherichia coli BW25113

 Score = 76.3 bits (186), Expect = 2e-18
 Identities = 111/471 (23%), Positives = 192/471 (40%), Gaps = 61/471 (12%)

Query: 10  IAIYLILTILISWF-VNQRSIGN--TDFSTGGRQFGWFTAGVSILATYISAMTFIGMPGW 66
           +  YL++   IS + + +RS G    ++  G R  G     +++ ATYISA +FIG PG 
Sbjct: 9   LVAYLVVVFGISVYAMRKRSTGTFLNEYFLGSRSMGGIVLAMTLTATYISASSFIGGPGA 68

Query: 67  VYQSGMEALNIHLNYPIVIFFAVVFFIPVFYRMGFTSIYEYLEHRFGVYAR-----TINS 121
            Y+ G+            +  A++    V+  +G       L  +F + AR     T+N 
Sbjct: 69  AYKYGLG----------WVLLAMIQLPAVWLSLGI------LGKKFAILARRYNAVTLND 112

Query: 122 VVF------ILVQCISSGVILYAIALILIQILP----ISIVEAIVYIT------LFTACY 165
           ++F      +LV   S  +++  +  + +Q +     +     I Y T      +  A Y
Sbjct: 113 MLFARYQSRLLVWLASLSLLVAFVGAMTVQFIGGARLLETAAGIPYETGLLIFGISIALY 172

Query: 166 TYAGGISTVIWTDMLQSAVLIAGSVAIFVLLLLQVDGVHGVSR--EQLNIINLQF--DLG 221
           T  GG    +  D +Q  V++ G+V   VLL+  V    G+S   + L  I+ Q     G
Sbjct: 173 TAFGGFRASVLNDTMQGLVMLIGTV---VLLIGVVHAAGGLSNAVQTLQTIDPQLVTPQG 229

Query: 222 VDTTLWAGVVAVSFLHMSVYGTNQL--IIQRTLATRCEKTAQKSMLLCGYGAFFIYFFFA 279
            D  L +     SF  +  +G   L     R ++ +  K   + +++       + F   
Sbjct: 230 ADDIL-SPAFMTSFWVLVCFGVIGLPHTAVRCISYKDSKAVHRGIIIGTIVVAILMFGMH 288

Query: 280 LLGVLLSIFYQERHFTNSNEVILDFVFHHTNPWVIGLIISALAAAAMSTLDSTYNSMATV 339
           L G L      +   T  + VI   +     P+  G+ ++A  AA MST+++     +  
Sbjct: 289 LAGALGRAVIPD--LTVPDLVIPTLMVKVLPPFAAGIFLAAPMAAIMSTINAQLLQSSAT 346

Query: 340 ATFDLYQRFIRRNAPDHHYQAVARKMSLVAAGLVVIPALLAVSNESVLKTIASLTSIFVG 399
              DLY      N      Q   R   + A   +V+ ALL ++     + I  L  +  G
Sbjct: 347 IIKDLY-----LNIRPDQMQNETRLKRMSAVITLVLGALLLLAAWKPPEMIIWLNLLAFG 401

Query: 400 ----IRLGSFVLGLFSNQANEKGVIAGSIISIAAVLGARLMDIAWPWFAPI 446
               + L   VLGL+  +AN KG ++  I+          ++I +  F PI
Sbjct: 402 GLEAVFLWPLVLGLYWERANAKGALSAMIVGGVLYAVLATLNIQYLGFHPI 452