Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., cation/acetate symporter ActP from Escherichia coli ECRC62

 Score = 76.3 bits (186), Expect = 3e-18
 Identities = 93/454 (20%), Positives = 197/454 (43%), Gaps = 47/454 (10%)

Query: 4   YSTFIVIAIYLILTILISWFVNQRSIGNTDFSTGGRQFGWFTAGVSILATYISAMTFIGM 63
           +   I+  I+++ T+ I+++ ++R    +D+ T G     F  G++I   Y+SA +F+G+
Sbjct: 33  WQAIIMFLIFVVFTLGITYWASKRVRSRSDYYTAGGNITGFQNGLAIAGDYMSAASFLGI 92

Query: 64  PGWVYQSGMEALNIHLNYPI---VIFFAVVFFIPVFYRMGFTSIYEYLEHRFGVYARTIN 120
              V+ SG + L   L + +   +I F +   +    R  F  +  Y         R   
Sbjct: 93  SALVFTSGYDGLIYSLGFLVGWPIILFLIAERLRNLGRYTFADVASY---------RLKQ 143

Query: 121 SVVFILVQCISSGVI-LYAIALI-----LIQIL-PISIVEAIVYITLFTACYTYAGGIST 173
             + IL  C S  V+ LY IA +     LI++L  ++   A+V + +    Y   GG+  
Sbjct: 144 GPIRILSACGSLVVVALYLIAQMVGAGKLIELLFGLNYHIAVVLVGVLMMMYVLFGGMLA 203

Query: 174 VIWTDMLQSAVLIAGSVAIFVLLLLQVD-GVHGVSREQLNIINLQFDLGVDTTLWAGVV- 231
             W  ++++ +L+ G+  +  +++  V    + +  E + +       GVD     G+V 
Sbjct: 204 TTWVQIIKAVLLLFGASFMAFMVMKHVGFSFNNLFSEAMAV----HPKGVDIMKPGGLVK 259

Query: 232 -AVSFLHMS---VYGTNQL--IIQRTLATRCEKTAQKSMLLC-GY-GAFFIYFFFALLGV 283
             +S L +    ++GT  L  I+ R       + A+KS+    G+ G F+I  F    G 
Sbjct: 260 DPISALSLGLGLMFGTAGLPHILMRFFTVSDAREARKSVFYATGFMGYFYILTFIIGFGA 319

Query: 284 LLSI----FYQER--HFTNSNEVILDFVFHHTNPWVIGLIISALAAAAMSTLDSTYNSM- 336
           ++ +     Y++   H    N +      H  N     L +  ++A A +T+ +    + 
Sbjct: 320 IMLVGANPEYKDAAGHLIGGNNMA---AVHLANAVGGNLFLGFISAVAFATILAVVAGLT 376

Query: 337 ---ATVATFDLYQRFIRRNAPDHHYQAVARKMSLVAAGLVVIPALLAVSNESVLKTIASL 393
              A+  + DLY    ++ A +     V+ K++++  G++ I   +   N+++   +   
Sbjct: 377 LAGASAVSHDLYANVFKKGATEREELRVS-KITVLILGVIAIILGVLFENQNIAFMVGLA 435

Query: 394 TSIFVGIRLGSFVLGLFSNQANEKGVIAGSIISI 427
            +I         +L ++ ++   +G + G  + +
Sbjct: 436 FAIAASCNFPIILLSMYWSKLTTRGAMMGGWLGL 469