Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., L-arabinose symporter (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  140 bits (354), Expect = 1e-37
 Identities = 117/494 (23%), Positives = 218/494 (44%), Gaps = 49/494 (9%)

Query: 7   FIVIAIYLILTILISWFVNQRSIG----NTDFSTGGRQFGWFTAGVSILATYISAMTFIG 62
           +++  +Y +  + +  +V++   G      ++    +   W+  G S+LA  ISA  FIG
Sbjct: 10  YVIFIVYALAIVSVGLWVSRTKKGLEKTAQEYFLADKSLTWWAVGASLLAANISAEHFIG 69

Query: 63  MPGWVYQSGMEALNIHLNYPIVIFFAVVFFIPVFYRMGFTSIYEYLEHRFGVYARTINSV 122
             G  +  G+          I +     +F+P+F + G  ++ ++L  RF     T  +V
Sbjct: 70  TSGSGFAIGLGISAYEWIAAIALIIVAKYFLPIFLKHGVYTMPQFLSERFNKGVSTAFAV 129

Query: 123 VFILVQC-ISSGVILYAIALILIQILPISIVEAIVYITLFTACYTYAGGISTVIWTDMLQ 181
            ++LV   ++   + Y  AL L +I+ I +   I+ + +F+  Y+  GG+  V WTD++Q
Sbjct: 130 FWLLVYVFVNLTSVSYLGALALDKIMGIPLQYGIIGLLIFSGIYSIYGGLEAVAWTDVVQ 189

Query: 182 SAVLIAGSVAIFVLLLLQVDGVHGVSREQLNIINLQFD----------------LGVDTT 225
             +L+AG +    L L  V    G+     N+ N   D                LG    
Sbjct: 190 VIILVAGGLITTFLALDAVGMGDGIFAGMSNLYNDAKDHFVMIMPQGRVMVPDGLGGSRD 249

Query: 226 LWAGVVAVSFL-------HMSVYGTNQLIIQRTLATRCEKTAQKSMLLCGYGAFFIYFFF 278
            +  +  ++ +       ++  +G NQ IIQ+ LA +  + A+K +L  GY    +    
Sbjct: 250 AFQDLPGLAVILGGMWLTNLGYWGFNQYIIQKGLAAKSIEEAKKGLLFAGYLKLLMPIIV 309

Query: 279 ALLGVLLSIFYQERHFTNSNEVILDFVFHHTN---------PWVI---------GLIISA 320
            + G+   +   + +       IL+    H           PW++         GL  +A
Sbjct: 310 VIPGIAAYVLIND-YSPEQLAAILNMPVEHIGTIQKSDEAYPWLLRNFIPNGIRGLAFAA 368

Query: 321 LAAAAMSTLDSTYNSMATVATFDLYQRFIRRNAPDHHYQAVARKMSLVAAGLVVIPALLA 380
           LAAA +S+L S  NS +T+ T D+Y+ + + NA +H      R +++VA  + +I A   
Sbjct: 369 LAAAIVSSLASMINSTSTIFTMDIYKVYFKPNANNHQLVRTGRIVAVVALAIAMIVAPQL 428

Query: 381 VSNESVLKTIASLTS-IFVGIRLGSFVLGLFSNQANEKGVIAGSIISIAAVLGARLMDIA 439
            S + V + I   T  I+ G+ +  F +GL   QA     +  +I +I A +  ++    
Sbjct: 429 ASLDQVFQYIQEYTGYIYPGV-VVVFGMGLIWRQATASAALWTAIATIPAGIVFKIFYPE 487

Query: 440 WPWFAPIGTVFFLV 453
            P+   +G VF ++
Sbjct: 488 MPFLLRMGYVFIIL 501