Pairwise Alignments

Query, 513 a.a., sodium:solute symporter from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., transporter for D-glucose/D-galactose/D-xylose/methyl-beta-D-galactopyranoside (from data) from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  152 bits (384), Expect = 3e-41
 Identities = 126/556 (22%), Positives = 236/556 (42%), Gaps = 65/556 (11%)

Query: 2   VTYSTF--IVIAIYLILTILISWFVNQRSIGNT----DFSTGGRQFGWFTAGVSILATYI 55
           +T++T   +V   Y +L I +   V++   G+     D+    +   W+  G S++A+ I
Sbjct: 1   MTFNTLDLVVFVAYCLLIITMGIVVSREKKGHVKDSKDYFLASKALPWWAVGASLIASNI 60

Query: 56  SAMTFIGMPGWVYQSGMEALNIHLNYPIVIFFAVVFFIPVFYRMGFTSIYEYLEHRFGVY 115
           SA  FIGM G  +  G+            +    +FF+P++ + G  ++ ++L  R+   
Sbjct: 61  SAEQFIGMSGSGFALGLAISTYEWMAAATLLVVAIFFLPIYLKEGIYTMPQFLNRRYDGR 120

Query: 116 ARTINSVVFILVQC-ISSGVILYAIALILIQILPISIVEAIVYITLFTACYTYAGGISTV 174
            RT+ ++ ++L+   ++   +LY  AL L  I+ + +   I+ + LF   Y+  GG+  V
Sbjct: 121 VRTVMAIFWLLIYVFVNLTSVLYLGALSLETIMGVPLTYGIIGLALFAMVYSIYGGLKAV 180

Query: 175 IWTDMLQSAVLIAGSVAIFVLLLLQV--------------------------------DG 202
            WTD++Q   L+AG +A   L L  V                                DG
Sbjct: 181 AWTDVVQVVFLVAGGLATTYLALSLVGDGDVWEGIGILRKAAPSHFSMIIEKGEMMIPDG 240

Query: 203 VHGVSREQLNIINLQFDLGVDTTLWAGVVAVSFLHMSVYGTNQLIIQRTLATRCEKTAQK 262
             G     L++  L   +G    +W        ++++ +G NQ I QR LA +    AQ 
Sbjct: 241 SGGSRDAYLDLPGLSVLIG---GMW-------IVNLNYWGCNQYITQRALAAKSLGEAQT 290

Query: 263 SMLLCGYGAFFIYFFFALLGVLLSIFYQERHFTNSNEVILDFV-------------FHHT 309
            M+  G+    +     + G+   +  Q+    +  E + D V              H  
Sbjct: 291 GMVFAGFLKLLMPLIVVIPGIAAYVIVQKGADASFIESMTDPVTGLAKSDRAYPTLLHLL 350

Query: 310 NPWVIGLIISALAAAAMSTLDSTYNSMATVATFDLYQRFIRRNAPDHHYQAVARKMSLVA 369
            P + GL  +AL AA +S+L S  NS +T+ T D+Y+ F  +N  +     + R  ++VA
Sbjct: 351 PPGLKGLAFAALTAAIVSSLASMANSTSTIFTIDIYKEFFNKNVSEGKQVTIGRITAVVA 410

Query: 370 AGLVVIPALLAVSNESVLKTIASLTSIFVGIRLGSFVLGLFSNQANEKGVIAGSIISIAA 429
             +  I A      +   + I   T          F+ G F  +      +  ++++I  
Sbjct: 411 FIIAAIVAPQLRQLDQAFQYIQEYTGFVSPGVFAIFIFGFFWKKTTSNAALTAAVLTIPL 470

Query: 430 VLGARLMDIAWPWFAPIGTVFFLVSGVV--ISRYWGDNSIQQQAFIARQKHLFATPTMSQ 487
               +++    P+   +G VF ++S ++  IS Y G     ++A I     LF+T T  +
Sbjct: 471 SAAFKVITPNLPFIDRMGVVFLVLSVLIIAISLYEGKGKDSKKA-IEVDAELFSTSTKFK 529

Query: 488 YGLLVFAAVTIAVCAI 503
            G ++   + +A+ ++
Sbjct: 530 VGAVLICGILVALYSV 545