Pairwise Alignments

Query, 459 a.a., anaerobic C4-dicarboxylate transporter DcuC from Vibrio cholerae E7946 ATCC 55056

Subject, 455 a.a., putative transporter from Escherichia coli BL21

 Score =  313 bits (801), Expect = 1e-89
 Identities = 171/454 (37%), Positives = 276/454 (60%), Gaps = 5/454 (1%)

Query: 5   MLELLIGLVVTFAVGYFIVKGYKPAGILLTAGILLLILTGILGHKVLPGQMESTGNLLTD 64
           M  ++I ++V   +GY I+K YKP  +L  AGI L++    LG   +    +S+G L+ D
Sbjct: 1   MFGIIISVIVLITMGYLILKNYKPQVVLAAAGIFLMMCGVWLGFGGVLDPTKSSGYLIVD 60

Query: 65  AMEYVKYMLQNRGGGLGMQIMLLCGFASYMTHIGANNVVVKQFSKPLSFIKSPYILLVAA 124
               +  ML NR  GLG+ IM + G+A YM  IGA+  +V   S+PL  I+SPYI+L A 
Sbjct: 61  IYNEILRMLSNRIAGLGLSIMAVGGYARYMERIGASRAMVSLLSRPLKLIRSPYIILSAT 120

Query: 125 YLVACLMSLAVSSATGLGVLLMATLFPMMTAMGISRPAAVAVCASPAAIILSPTSGDVVI 184
           Y++  +M+  ++SA+GLG+LLM TLFP + ++G+SR +AVAV A+  +I       + + 
Sbjct: 121 YVIGQIMAQFITSASGLGMLLMVTLFPTLVSLGVSRLSAVAVIATTMSIEWGILETNSIF 180

Query: 185 AAEKSGLPLHVFAVETVLPVSICAIIVMAAAAYFWNQYLDKKD-NTPMEKVDLSEMEVKS 243
           AA+ +G+ +  +     LPV+ C II +A + +F  +  DKKD N   E+ +   ++   
Sbjct: 181 AAQVAGMKIATYFFHYQLPVASCVIISVAISHFFVQRAFDKKDKNINHEQAEQKALDNVP 240

Query: 244 PAYYAVLPFLPII---GVFVFNGETLPGITLDIYTIVVLSIFIGVLVDYITKRFNGKQTL 300
           P YYA+LP +P+I   G        L    L +  +++LS+ + + V++  K  N ++T+
Sbjct: 241 PLYYAILPVMPLILMLGSLFLAHVGLMQSELHLVVVMLLSLTVTMFVEFFRKH-NLRETM 299

Query: 301 EDLEACYEGMADAFKGVVMLLVAAGVFAQGLMSIGAIDNLLHLAEVAGAGGIALMLILTG 360
           +D++A ++GM   F  VV L+VA  +FA+GL +IG +D ++  AE +G GGI +M+I+  
Sbjct: 300 DDVQAFFDGMGTQFANVVTLVVAGEIFAKGLTTIGTVDAVIRGAEHSGLGGIGVMIIMAL 359

Query: 361 LTVAAAIATGSGNAPFYAFVELAPSLAAKMGLNPAFLIIPMLQASNLGRTISPVSGVVVA 420
           +    AI  GSGNAPF +F  L P++AA + +    +I+PM  A+ L R +SP++ VVV 
Sbjct: 360 VIAICAIVMGSGNAPFMSFASLIPNIAAGLHVPAVVMIMPMHFATTLARAVSPITAVVVV 419

Query: 421 TAGMGKISPFEVVKRTSVPVLLGLVTVIIGTMVL 454
           T+G+  +SPF VVKRT++P+ +G V  +I T+ L
Sbjct: 420 TSGIAGVSPFAVVKRTAIPMAVGFVVNMIATITL 453