Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  173 bits (439), Expect = 2e-47
 Identities = 131/460 (28%), Positives = 235/460 (51%), Gaps = 33/460 (7%)

Query: 150 LALVDFHQQVLAGSANSSALNQ-FSDLIKSAQAV-VNQAKVIGLKYNEGLLGATRSHSHD 207
           +AL+  + +++A + ++S L +  SDL+ S +   +NQ K   ++Y+       + H H 
Sbjct: 259 MALISSNGRLVAYTKDASKLGEKASDLLDSNELTNLNQLKAGEVRYD-----IDKEHGHI 313

Query: 208 VEEMFKAFS-------------KTLTQAVDDKQKTMT-------TTKLSVTIAVVLII-- 245
             E+F  F+               L+  + D QK  +       T    +TIA +LI   
Sbjct: 314 --ELFLPFTIGQADARWTLMLQLPLSAVMADSQKLQSDLEAQRKTDIFGMTIAGLLIAGI 371

Query: 246 -LLVIFQISRSINLQVSQLLLVIQRIAQSN-DISLRAELKGNDEITAVARYFNSLLDKFE 303
            LLVI+ +   I   + Q++ ++  IAQ   D++ R      DE+ A+A  FN+ L K +
Sbjct: 372 GLLVIWLVGHGIARPLKQMVAMLNDIAQGEGDLTRRLTSDRADELGAIANGFNTFLIKLQ 431

Query: 304 HLISSSQTKSHQLYSSTSSMHDELEQVIEQFNVQSEHMGLMATSVQQMVSTISEISESTN 363
            +I+   +   ++  S+    D   +  +  + Q   +  +AT+V +M +T  +++ +  
Sbjct: 432 GMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQDVARNAT 491

Query: 364 IAVDGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQKSQHSIGSLNAFVEKIGGAVSIIQG 423
            A    + A + A QG  +V  T  +I  L+  + K+   + +L    E I   ++ I+G
Sbjct: 492 QAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENINAILTAIRG 551

Query: 424 IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTHQSTEEITRVVSNIQSQMSQ 483
           IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +T ++TEEI  ++  +Q     
Sbjct: 552 IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQLQQGTRD 611

Query: 484 VVDDIDLCNNQGQETLSASRQLDESLQQILRDMHTIQDNSQRIAAAIEEQGSVMNHVSES 543
           VV  ++   ++  E++  + +  E+L+ I + +  I D + +IA+A EEQ +V   ++ +
Sbjct: 612 VVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQSAVAEDINRN 671

Query: 544 IAELNTISENNMRSAQQCLTEVDTVSRQAHAMDEAVAEFR 583
           +  +  ++      A +       +++ A      + +F+
Sbjct: 672 VINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFK 711