Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  181 bits (458), Expect = 9e-50
 Identities = 112/365 (30%), Positives = 200/365 (54%), Gaps = 4/365 (1%)

Query: 223 VDDKQKTMTTT--KLS-VTIAVVLIILLVIFQISRSINLQVSQLLLVIQRIAQS-NDISL 278
           VDD Q   ++   K S + +A+ L++ L++  I+RSI   +   +  +  IA   +D++ 
Sbjct: 179 VDDVQAEFSSQVWKASFIGLAIALVMALLVSLIARSIVRPLQAAVNAMGNIASGESDLTR 238

Query: 279 RAELKGNDEITAVARYFNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNVQS 338
             +  G DE+T ++R+FNS   K   ++   Q  ++ L  S+  +     Q  ++   QS
Sbjct: 239 SLDTHGQDEVTQLSRHFNSFTAKLRQVVGQLQVCANALGQSSQELGSNATQAHDRSQQQS 298

Query: 339 EHMGLMATSVQQMVSTISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQ 398
           + M L+AT++ ++   + +++++   A   +  A   A+QG+  + ++++ ID LS T+ 
Sbjct: 299 QQMELVATAINEVTYGVQDVAKNAEHAASEMRDAQAQAQQGQVNIDSSLQQIDQLSGTIS 358

Query: 399 KSQHSIGSLNAFVEKIGGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRS 458
           ++   I +L+A   +IG  + +I+ IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR 
Sbjct: 359 QAVEVIRTLSAESTQIGSVLEVIRSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRL 418

Query: 459 LATRTHQSTEEITRVVSNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQILRDMHT 518
           LA RT +ST EI  ++  +Q      V  I   ++  Q T+  + Q   SL  I   +  
Sbjct: 419 LAQRTQKSTAEIQGMIERLQGHSEAAVKVISDSHSASQMTIEQAGQAGASLTAIGESLRN 478

Query: 519 IQDNSQRIAAAIEEQGSVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQAHAMDEA 578
           +   +  IA+A  +Q  V+  +++++ E   +S +   +A+Q       +   +  +D  
Sbjct: 479 LNGLNASIASATLQQAHVVEDINQNVTEAAGLSHSTALAAEQSSVASAHLRGLSEQLDGL 538

Query: 579 VAEFR 583
           + +F+
Sbjct: 539 LRQFK 543