Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  178 bits (451), Expect = 6e-49
 Identities = 139/482 (28%), Positives = 227/482 (47%), Gaps = 33/482 (6%)

Query: 104 LLEYKQGFEQLVRAYQTLGLNPESGLWKSYYQALEQAKQQASAEELLALVDFHQQVLAGS 163
           L E K    +    YQ L + P   +    ++A E+A+     E+++ L           
Sbjct: 88  LTEIKANLHRARTLYQGLIVLPAEQVLFDRFKA-EEARYLERQEQVVTL----------- 135

Query: 164 ANSSALNQFSDLIKSAQAVVNQAKVIGLKYNEGLLGATRSHSHDVEEMFKAFSKTLTQAV 223
              S  NQ  D I+     +NQ            + AT      + E+      +  QA 
Sbjct: 136 ---SKANQLEDAIRVVNGEMNQLA--------DEMAAT------LRELVTLNKTSANQAA 178

Query: 224 DDKQKTMTTTKLSVTIAVVLIILLVI---FQISRSINLQVSQLLLVIQRIAQSNDISLRA 280
              Q   + +++ V   +VL  L+ I     ++RSI L ++Q L V Q +A S D++   
Sbjct: 179 SLAQSVFSQSRIWVIGMIVLTALVTIGLAVLLTRSIVLPLAQSLKVAQGVA-SGDLTGEI 237

Query: 281 ELKGNDEITAVARYFNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNVQSEH 340
            + G DE   + +   S+ +     I      S+QL S++  +    E      + QS+ 
Sbjct: 238 SVCGRDEPARLQQALKSMQENLRDTIRRISESSNQLASASEELSCVTEDATRGLHQQSQE 297

Query: 341 MGLMATSVQQMVSTISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQKS 400
           +   AT+V QM + + E++ +         ++ R A++GR  V  TV +I+ L++ +  +
Sbjct: 298 IEQAATAVNQMTAAVEEVASNAVATSQASRESDRIAQRGREQVQQTVVSIEALATDVTDN 357

Query: 401 QHSIGSLNAFVEKIGGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA 460
              +  L   V  I   + +I+ IAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR+LA
Sbjct: 358 VTQVEDLAQKVYGISKVLDVIRSIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRALA 417

Query: 461 TRTHQSTEEITRVVSNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQILRDMHTIQ 520
            RT QST+EI +++S IQ    Q V  +   N + + TL  ++    +L++I      I 
Sbjct: 418 HRTQQSTQEIEQMISGIQQGTDQAVSSMQQSNTRARSTLDIAKSAGTALEEIASAFTLIN 477

Query: 521 DNSQRIAAAIEEQGSVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQAHAMDEAVA 580
           + +  IA+A E+Q +V   V  ++  +  ++      A Q       +SR A  ++  VA
Sbjct: 478 ERNLVIASASEQQAAVAREVDRNLMNIRDLAHQTSTGANQTSAASHDLSRLAVDLNTLVA 537

Query: 581 EF 582
            F
Sbjct: 538 RF 539