Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  181 bits (459), Expect = 8e-50
 Identities = 126/441 (28%), Positives = 224/441 (50%), Gaps = 17/441 (3%)

Query: 152 LVDFHQQVLAGSANSSALNQFSDLIKSAQAVVNQ-AKVIGLKYNEGLLGATRSHSHDVEE 210
           LV    QV+        +    D+    Q  + + ++ + L   + +L  T        +
Sbjct: 193 LVSSDGQVIVSPEQDQVMKNLKDIYPGTQVRIEKVSQDVVLNGQDRILSFTPISGLPGAD 252

Query: 211 MFKAFSKTLTQAVDDKQKTMTTTKLSVTIAVVLIILLVIFQISRSINLQVSQLLLVIQRI 270
            +   S    +A     K  T+  +++ IAVV I +L+   I   +   ++ + + +Q I
Sbjct: 253 WYIGLSIDKDKAYAPLGKFRTSALIAMLIAVVAIAVLLSLLIQVLLR-PLTTMGVAMQDI 311

Query: 271 AQSN-DISLRAELKGNDEITAVARYFNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQ 329
           AQ   D++ R  +   DE   V   FN  +++    IS       ++ S+T  +HD  ++
Sbjct: 312 AQGEGDLTRRLVVTSKDEFGEVGSAFNQFVERIHASIS-------EVSSATRQVHDLSQR 364

Query: 330 VIEQFNV-------QSEHMGLMATSVQQMVSTISEISESTNIAVDGVNQAARNAEQGRSV 382
           V+   N        QS     +A ++ ++ +   EI+ +   A    + A+  A+ GR V
Sbjct: 365 VMASSNASIIGSDEQSARTNSVAAAINELGAATQEIARNAADASQHASGASEQADDGRKV 424

Query: 383 VVTTVKNIDLLSSTLQKSQHSIGSLNAFVEKIGGAVSIIQGIAEQTNLLALNAAIEAARA 442
           V  T+  +  LS  +  S   I +LNA  + IG  + +I+GI++QTNLLALNAAIEAARA
Sbjct: 425 VEQTILAMSELSQKISLSCTQIETLNASTDNIGHILDVIKGISQQTNLLALNAAIEAARA 484

Query: 443 GEQGRGFAVVADEVRSLATRTHQSTEEITRVVSNIQSQMSQVVDDIDLCNNQGQETLSAS 502
           GE GRGFAVVADEVR+LA RT +S EEI ++++++Q    + V  ++      +E++  +
Sbjct: 485 GEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAVTTMNASQTSSEESVEVA 544

Query: 503 RQLDESLQQILRDMHTIQDNSQRIAAAIEEQGSVMNHVSESIAELNTISENNMRSAQQCL 562
            Q  E L  + + +  I   +Q +AAA EEQ +V+  ++  I ++N +++  + +  + L
Sbjct: 545 NQAGERLVSVTQRIVEIDGMNQSVAAATEEQTAVVETLNVDINQINLLNQQGVANLNETL 604

Query: 563 TEVDTVSRQAHAMDEAVAEFR 583
            + D +S+QA+ + + V  F+
Sbjct: 605 KDCDALSQQANRLKQLVDSFK 625