Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 639 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  172 bits (436), Expect = 4e-47
 Identities = 105/356 (29%), Positives = 190/356 (53%), Gaps = 3/356 (0%)

Query: 230 MTTTKLSVTIAVVLII-LLVIFQISRSINLQVSQLLLVIQRIAQSN-DISLRAELKGNDE 287
           M   ++ + + ++L++ LL  + ++R +N ++  +   +  IA+ + D++ R +++  DE
Sbjct: 284 MLMVQIGIGLGILLVMALLTSWFVARQLN-ELGNIANALADIAEGDGDLTRRLDVRSQDE 342

Query: 288 ITAVARYFNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNVQSEHMGLMATS 347
           +  +A  FN  +D+   ++ + +  S  L            Q  ++   Q + + ++AT+
Sbjct: 343 VGLLADKFNKFVDRLHQMVKNVREVSVALTQGADHAAASATQASKRIRTQQDEITMVATA 402

Query: 348 VQQMVSTISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQKSQHSIGSL 407
           V +M S  +EI+ +         Q+ +  E G + +  + ++ID L+  L  +   I  L
Sbjct: 403 VTEMASATAEIASNAENTAKNATQSVQLGEDGFAQMQQSKQSIDQLAQELTGAVRIISEL 462

Query: 408 NAFVEKIGGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTHQST 467
                +I   +S I+GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RTH ST
Sbjct: 463 EVHANEISTILSTIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHAST 522

Query: 468 EEITRVVSNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQILRDMHTIQDNSQRIA 527
           EEI   ++ +Q   +  V  +   +   + +++   Q   SLQ I   +  I D + +IA
Sbjct: 523 EEIQTKIAGLQKVTTTAVSVMTESHKLVETSVADVNQTGASLQAISEAIQQISDMATQIA 582

Query: 528 AAIEEQGSVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQAHAMDEAVAEFR 583
           +A EEQ  V   ++ +   +  +S+     AQQ + +  ++   A  +++ ++ F+
Sbjct: 583 SAAEEQSLVTADINVNTESVREVSDQLAEEAQQSVQQAKSLHAMAQELNKEISRFK 638