Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  175 bits (443), Expect = 6e-48
 Identities = 112/358 (31%), Positives = 193/358 (53%), Gaps = 17/358 (4%)

Query: 236 SVTIAVVLIILLV--IFQISRSINLQVSQLLLVIQRIAQ-SNDISLRAELKGNDEITAVA 292
           ++T  +VLI + V  I  I   I   + +L + +  +AQ S D++ R E+ GND++  ++
Sbjct: 291 AITTGIVLIGISVGVIIFIINQIYKPLLRLKVAVLDLAQGSGDLTRRLEVNGNDDLAQIS 350

Query: 293 RYFNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNVQSEHMGLMATSVQQMV 352
             FN      ++++        Q+  +T  +   +EQ+ +      + +   ++   Q+V
Sbjct: 351 EGFNRFSGNLQNMML-------QISDATQIISSSIEQLSQTAKENEQMLISHSSETDQVV 403

Query: 353 STISEISESTNIAVDGVNQ-------AARNAEQGRSVVVTTVKNIDLLSSTLQKSQHSIG 405
           + I+++SES     + V Q       A++ A+Q   +V   V  +  L + ++    SI 
Sbjct: 404 TAITQMSESARTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTVTSLVNDVENMSESIS 463

Query: 406 SLNAFVEKIGGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTHQ 465
           ++N    KI   +S+I  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RT  
Sbjct: 464 NMNRDANKISEVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQN 523

Query: 466 STEEITRVVSNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQILRDMHTIQDNSQR 525
           ST EI+ +++ +      VV  ++    Q Q T   + ++  SL  +   +  I D S +
Sbjct: 524 STTEISDMLTKLLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLNMMSASVSDIDDLSTQ 583

Query: 526 IAAAIEEQGSVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQAHAMDEAVAEFR 583
           IAAA E+Q +V   +S ++  +  I E+ + S +Q +   +++S   H +++ V +F+
Sbjct: 584 IAAATEQQSTVAAELSRNMLSIREIVESLVVSGRQTVGATESLSHSNHELEQLVGKFK 641