Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., methyl-accepting chemotaxis protein HlyB from Vibrio cholerae E7946 ATCC 55056

 Score =  189 bits (479), Expect = 3e-52
 Identities = 113/351 (32%), Positives = 191/351 (54%), Gaps = 1/351 (0%)

Query: 233 TKLSVTIAVVLIILLVI-FQISRSINLQVSQLLLVIQRIAQSNDISLRAELKGNDEITAV 291
           TK  V IA  LII  +    I  ++  +V+ L   +   A +  +  R EL GNDE+  +
Sbjct: 196 TKQMVIIAAGLIISFITSLVIITNLRSRVAYLKDRMSSAAANLSLRTRLELDGNDELCDI 255

Query: 292 ARYFNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNVQSEHMGLMATSVQQM 351
            + FN+ +DK  H I      S +L +  SS+             Q +    +AT++ ++
Sbjct: 256 GKSFNAFIDKVHHSIEEVAENSKELATMASSVSQRAHMTQSNCASQRDRTVQVATAIHEL 315

Query: 352 VSTISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQKSQHSIGSLNAFV 411
            +T+SEI+ +  +A D   QA  ++ +G+ VV      I  L + L  +   + SL   +
Sbjct: 316 GATVSEIASNAAMAADVAKQATLHSGEGKKVVGEVQNRIQTLVNELDNATQVVSSLATQI 375

Query: 412 EKIGGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTHQSTEEIT 471
             I   +  I+ I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA+R+  STEEI 
Sbjct: 376 NGISSTLDTIRSISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSAASTEEIQ 435

Query: 472 RVVSNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQILRDMHTIQDNSQRIAAAIE 531
           +V++ +Q++ ++ V+ ++   +Q    +  S + ++SL +I   +  I D + ++A A E
Sbjct: 436 QVINRLQTESTRAVEAMEKGRSQSDVVVEFSAKANQSLTEINSQIDQINDQNIQVATATE 495

Query: 532 EQGSVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQAHAMDEAVAEF 582
           EQ +V+  ++ ++ ++N ++      A +      ++ R +  +D+ V  F
Sbjct: 496 EQSTVVEDINRNVEDINQLTTETSHVADELSRASASLQRLSSQLDKLVGSF 546