Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 644 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  202 bits (513), Expect = 4e-56
 Identities = 116/347 (33%), Positives = 200/347 (57%), Gaps = 1/347 (0%)

Query: 238 TIAVVLIILLVIFQISRSINLQVSQLLLVIQRIAQSN-DISLRAELKGNDEITAVARYFN 296
           T+AV  I + +   ++ SI + ++Q+      + + + D+S R E+KGNDEI  +++ FN
Sbjct: 297 TLAVAAIFIFMGIFLANSIAMPINQIAKRFTDLGRGDGDLSQRIEVKGNDEIAQLSKGFN 356

Query: 297 SLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNVQSEHMGLMATSVQQMVSTIS 356
             ++K    I      S +L  +   +  +     +    Q +    + T++ QM +TIS
Sbjct: 357 GFIEKIHQSIKDVAQTSRELQVAAEGVSRKALVTHDNSQQQRDQTIQVVTAINQMGATIS 416

Query: 357 EISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQKSQHSIGSLNAFVEKIGG 416
           EI+ +   A +  NQA+ NA+QGR+VV    + I  L+  ++ +   +  L +  ++IG 
Sbjct: 417 EIASNAATAAETANQASGNADQGRNVVNKAKEAISRLAHDIENTGKVVEQLASTTQEIGS 476

Query: 417 AVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTHQSTEEITRVVSN 476
            +  I+GI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR+LA+RT  STEEI ++++ 
Sbjct: 477 ILDAIRGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTASSTEEIQKMINQ 536

Query: 477 IQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQILRDMHTIQDNSQRIAAAIEEQGSV 536
           +Q+     V  +D       + ++AS +  + L  I   +H I D + ++A A EEQ +V
Sbjct: 537 LQNDAKNAVSAMDAGKTVTHQGVAASDEAVQVLMSISDRIHDISDRNTQVATATEEQSTV 596

Query: 537 MNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQAHAMDEAVAEFR 583
           ++ ++++I E+N I+E    +A++      ++   +  +D+ V  F+
Sbjct: 597 VHTINQNIEEINAINEVTTSTAEELADASKSLRELSGRLDKLVGNFK 643