Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 596 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  186 bits (471), Expect = 3e-51
 Identities = 114/331 (34%), Positives = 182/331 (54%), Gaps = 1/331 (0%)

Query: 252 ISRSINLQVSQLLLVIQRIAQSNDISLRAELKGNDEITAVARYFNSLLDKFEHLISSSQT 311
           I++ +N  V  L      IA + D++ R  + GNDE + +A+Y N ++  F+ +ISS++ 
Sbjct: 265 IAKRVNNAVHHLASSATHIA-AGDLTQRIPVTGNDEFSDIAKYVNRIVTSFQEVISSNRH 323

Query: 312 KSHQLYSSTSSMHDELEQVIEQFNVQSEHMGLMATSVQQMVSTISEISESTNIAVDGVNQ 371
               L ++         Q  +    Q      +A ++ Q  +T+ E+++S  +A +   +
Sbjct: 324 SVSALATAAEENAAVAMQTKQNIVEQQSQTQQIAAAIHQFTATVHEVAQSAGLAAEASEE 383

Query: 372 AARNAEQGRSVVVTTVKNIDLLSSTLQKSQHSIGSLNAFVEKIGGAVSIIQGIAEQTNLL 431
           A + A QGR VV   +  I+ LS+ LQK   ++  L    E IG  V +IQ I+EQTNLL
Sbjct: 384 AEQAAMQGRKVVEENIAMIEGLSNDLQKMLAAMQLLAKDSEDIGSVVDVIQSISEQTNLL 443

Query: 432 ALNAAIEAARAGEQGRGFAVVADEVRSLATRTHQSTEEITRVVSNIQSQMSQVVDDIDLC 491
           ALNAAIEAARAGEQGRGFAVVADEVR+LA+RT +ST++I + V  +Q       + I+  
Sbjct: 444 ALNAAIEAARAGEQGRGFAVVADEVRTLASRTQESTKQILQTVQRLQQSSRDSANLIEQG 503

Query: 492 NNQGQETLSASRQLDESLQQILRDMHTIQDNSQRIAAAIEEQGSVMNHVSESIAELNTIS 551
            +   + +  +R    +L QI  ++  I   + +IA A EEQ +V   ++++I  ++ IS
Sbjct: 504 VSGASKAVEKARLAGTALSQITANVDRISTMNTQIATASEEQSAVTEEINKNIITISEIS 563

Query: 552 ENNMRSAQQCLTEVDTVSRQAHAMDEAVAEF 582
                 AQQ       ++R A +M + VA +
Sbjct: 564 NQTALGAQQSSEATLELARLAESMQQEVARY 594