Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  165 bits (418), Expect = 4e-45
 Identities = 102/346 (29%), Positives = 182/346 (52%), Gaps = 2/346 (0%)

Query: 239 IAVVLIILLVIFQISRSINLQVSQLLLVIQRIAQSN-DISLRAELKGNDEITAVARYFNS 297
           + +V  I+ V   +SR I   +  ++  +Q +A    D++ R +++  DEI  VA+ FN+
Sbjct: 219 VGLVFTIIAVSVLVSRGI-APLQHVVSSLQAVAAGGGDLTARIKVESQDEIGDVAKAFNA 277

Query: 298 LLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNVQSEHMGLMATSVQQMVSTISE 357
            +DK   L++  +  ++ + ++   +  +  Q   + +        +  +V +M +T  E
Sbjct: 278 FMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTEMSATARE 337

Query: 358 ISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQKSQHSIGSLNAFVEKIGGA 417
           ++ +T      +  A       +  V   +  I  L + + ++  ++G L+    KI   
Sbjct: 338 VASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQAAKITQV 397

Query: 418 VSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTHQSTEEITRVVSNI 477
           + +I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA+RT  ST+EI  +++ +
Sbjct: 398 LKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEIGEMLNAL 457

Query: 478 QSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQILRDMHTIQDNSQRIAAAIEEQGSVM 537
              +S+ V  +++   +G++T   S Q+ ESL  I + +  I D   + A+A E+Q +V 
Sbjct: 458 HQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASAAEQQSAVA 517

Query: 538 NHVSESIAELNTISENNMRSAQQCLTEVDTVSRQAHAMDEAVAEFR 583
             +++++  +  I      S +Q  +   ++S     M   V  F+
Sbjct: 518 EDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFK 563