Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  167 bits (423), Expect = 9e-46
 Identities = 106/346 (30%), Positives = 185/346 (53%), Gaps = 4/346 (1%)

Query: 242 VLIILLVIFQIS----RSINLQVSQLLLVIQRIAQSNDISLRAELKGNDEITAVARYFNS 297
           VLI++L +   S    R +  Q++ L  V+  + ++ D+S R  L   DE+  +A  FN+
Sbjct: 146 VLILMLAMLGASQLLIRFLLSQLNTLKDVMLHVEKTGDLSARVPLASGDEVGQMAGAFNA 205

Query: 298 LLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNVQSEHMGLMATSVQQMVSTISE 357
           +   +  ++S+    + QL S  + +   +  V      Q       AT++ +M +T+  
Sbjct: 206 MQSTYHRVVSTVAHSAAQLDSGAARLAASMSDVRHGMLGQQSETDQAATAINEMSATVHH 265

Query: 358 ISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQKSQHSIGSLNAFVEKIGGA 417
           I++      D    A   A  G++VV     +I  LSS +Q++   I  L    +KI G 
Sbjct: 266 IAQHAGATRDLSQTADTLAGSGQAVVSRVQDSISGLSSGVQQTAEMIRQLAEDSQKINGV 325

Query: 418 VSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTHQSTEEITRVVSNI 477
           VS+I  IAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR+LA R   ST+EIT +VS +
Sbjct: 326 VSVIHSIAEQTNLLALNAAIEAARAGDLGRGFAVVADEVRNLAKRVQTSTDEITTMVSAL 385

Query: 478 QSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQILRDMHTIQDNSQRIAAAIEEQGSVM 537
           QS     V+ +   + +  + +  +++  E+L +I   +  +++++ +IA A E+Q  V 
Sbjct: 386 QSGTRDAVEFMQESSYKADDCVRQAQEAGEALAEITGAVAQMRESNTQIAVAAEQQSQVA 445

Query: 538 NHVSESIAELNTISENNMRSAQQCLTEVDTVSRQAHAMDEAVAEFR 583
             ++ ++  +  ++E  ++      T    ++  A  +++A+ + +
Sbjct: 446 EEMNRAVVSIRDVTERTVQQTVGSATTSSELATLAGELNKAIGQLK 491