Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., Methyl-accepting chemotaxis protein PctB from Pseudomonas putida KT2440

 Score =  173 bits (439), Expect = 2e-47
 Identities = 111/371 (29%), Positives = 198/371 (53%), Gaps = 18/371 (4%)

Query: 224 DDKQKTMTTTKLSVTIAVVLIILLVIFQISRSINLQVSQLLLV---IQRIAQSN-DISLR 279
           D     ++  + S  IA+++ +  +   +   I + +S L  +   ++ IA+   D++ R
Sbjct: 279 DKAYAALSQFRTSAIIAMLIAVAAIAGLLGLLIPVLMSPLTTMGRAMRDIAEGEGDLTRR 338

Query: 280 AELKGNDEITAVARYFNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNV--- 336
             ++  DE   +A  FN  +++    IS       ++ S+T  +HD  E+V+   N    
Sbjct: 339 LAVQNKDEFGELATSFNRFVERIHASIS-------EVSSATRLVHDLSEKVVSASNASII 391

Query: 337 ----QSEHMGLMATSVQQMVSTISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDL 392
               QS     +A ++ ++ +   EI+ +   A    + A+  A  GR VV   +  +  
Sbjct: 392 GSEEQSMRTNSVAAAINELGAATQEIARNAADASQHASGASEQAHGGREVVEEAISAMTA 451

Query: 393 LSSTLQKSQHSIGSLNAFVEKIGGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVV 452
           LS  + +S   I +LNA  ++IG  + +I+GI++QTNLLALNAAIEAARAGE GRGFAVV
Sbjct: 452 LSQRISESCAQIETLNASTDEIGKILDVIKGISQQTNLLALNAAIEAARAGEAGRGFAVV 511

Query: 453 ADEVRSLATRTHQSTEEITRVVSNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQI 512
           ADEVR+LA RT +S EEI R+++++Q    + V  ++      ++T+  + Q  E L  +
Sbjct: 512 ADEVRNLAHRTQESAEEIHRMITSLQVGSREAVHTMNTSQVSSEQTVQVANQAGERLASV 571

Query: 513 LRDMHTIQDNSQRIAAAIEEQGSVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQA 572
            + +  I   +Q +A A EEQ +V+  ++  I ++N +++  + +  + L   D +++QA
Sbjct: 572 TQRIGEIDGMNQSVATATEEQTAVVESLNLDITQINALNQQGVENLNETLRHCDQLAQQA 631

Query: 573 HAMDEAVAEFR 583
             + + V  FR
Sbjct: 632 GRLKQLVGSFR 642