Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  162 bits (409), Expect = 4e-44
 Identities = 104/318 (32%), Positives = 165/318 (51%), Gaps = 11/318 (3%)

Query: 265 LVIQRIAQSNDISLRAELKGNDEITAVARYFNSLLDKFEHLISSSQTKSHQLYSSTSSMH 324
           L+ Q    S  +  R E+    +   +      L D  EHL   ++      + S++ + 
Sbjct: 213 LIAQMFTDSRGVQARLEMAMLSQDARMKTCLTRLQDSAEHLSDQARQSDALAHKSSTGL- 271

Query: 325 DELEQVIEQFNVQSEHMGLMATSVQQMVSTISEISESTNIAVDGVNQAARNAEQGRSVVV 384
                  E+  V++E +   A +V QM +T  E++       D   +A R   QGR +  
Sbjct: 272 -------ERQRVETEQV---AAAVNQMAATTQEVANHVQRTADATQEANRLTSQGRQIAG 321

Query: 385 TTVKNIDLLSSTLQKSQHSIGSLNAFVEKIGGAVSIIQGIAEQTNLLALNAAIEAARAGE 444
            T + I+ LS+ + ++  ++  L    ++IGG V +I+GIA+QTNLLALNAAIEAARAGE
Sbjct: 322 ETREAIERLSAAVGETGQTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGE 381

Query: 445 QGRGFAVVADEVRSLATRTHQSTEEITRVVSNIQSQMSQVVDDIDLCNNQGQETLSASRQ 504
            GRGFAVVADEVR LA RT +ST +I  +++ +Q   S  V  ++  + Q QE +    Q
Sbjct: 382 MGRGFAVVADEVRQLAQRTAESTGQIHGLIAKLQQTASNAVLTMETGHRQAQEGVDRVMQ 441

Query: 505 LDESLQQILRDMHTIQDNSQRIAAAIEEQGSVMNHVSESIAELNTISENNMRSAQQCLTE 564
            DE+L  I   +  I D + +IAAA EEQ +V + +S +I+ +  +++     AQ     
Sbjct: 442 ADEALVGISEAVANITDMATQIAAATEEQTAVADEISRNISTIAELADQTAEQAQHSALL 501

Query: 565 VDTVSRQAHAMDEAVAEF 582
            + ++  A +    V  F
Sbjct: 502 SEELTSTAGSQYSLVERF 519