Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  189 bits (481), Expect = 2e-52
 Identities = 117/373 (31%), Positives = 202/373 (54%), Gaps = 6/373 (1%)

Query: 218 TLTQAVDDKQKTMTTTKLSVTIAVVLIILLVIFQI-----SRSINLQVSQLLLVIQRIAQ 272
           T    ++  +   TTT+L+  I V+ ++L  +F +     ++ I   ++ +   ++ IAQ
Sbjct: 275 TFIGLIEQSEVMQTTTRLTWLIGVIAVVLAALFAVVGAAFAKLIVRPINSVTNGLEDIAQ 334

Query: 273 SN-DISLRAELKGNDEITAVARYFNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVI 331
              D++   E++G DE   +A +FN  L     LI    T + ++ S++SS       + 
Sbjct: 335 GEGDLTRNLEIRGRDETAQLANWFNQFLGAIRSLIQHIGTAASKILSTSSSSTRVSSDMA 394

Query: 332 EQFNVQSEHMGLMATSVQQMVSTISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNID 391
           E    Q E + +++T+  +MV+T +E++ S + A    +   + A +G+  +   V ++D
Sbjct: 395 EAAGRQREAVDMVSTAFHEMVATANEVARSCSQAAQSADSGQQQAREGQQQIDAAVHSVD 454

Query: 392 LLSSTLQKSQHSIGSLNAFVEKIGGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAV 451
            LS  +++S  SI  L      I   +  I+ IAEQTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 455 RLSHEIEQSAQSIQQLERDSNAIQSILGTIRSIAEQTNLLALNAAIEAARAGEQGRGFAV 514

Query: 452 VADEVRSLATRTHQSTEEITRVVSNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQ 511
           VADEVR+LA RT  ST EI  ++ N+ S+ ++V + +       Q+++S      +S  Q
Sbjct: 515 VADEVRALAKRTADSTAEIDGLLGNLASRTAEVAEQMHASLEVSQQSVSRIGLARDSFGQ 574

Query: 512 ILRDMHTIQDNSQRIAAAIEEQGSVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQ 571
           I   +  I+D + +IA A EEQ  V   ++  I++++  ++     AQ    + ++++  
Sbjct: 575 IRESVDVIRDMNTQIATAAEEQHQVAEDINRHISQIHGDAQLVAELAQAARQDSESLAGL 634

Query: 572 AHAMDEAVAEFRT 584
           ++ +D  V  FRT
Sbjct: 635 SNELDTLVRRFRT 647