Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Methyl-accepting chemotaxis transducer from Pseudomonas putida KT2440

 Score =  179 bits (454), Expect = 3e-49
 Identities = 132/470 (28%), Positives = 222/470 (47%), Gaps = 10/470 (2%)

Query: 123 LNPESGLWKSYYQALEQAKQQA--SAEELLALVDFHQQVLAGSANSSALNQFSDLIKSAQ 180
           LN E    +     L+Q   Q   + +  L ++    +  A       LNQ+  L    +
Sbjct: 74  LNREPATQRDTLDMLDQRNSQIDRARQAYLPMIVAADEQAAFDQYGQLLNQYRQLESRMR 133

Query: 181 AVVNQAKVIGLK--YNEGLLGATRSHSHDVEEMFKAFSKTLTQAVDDKQKTMTTTKLSVT 238
            +    ++  L+   N  LL A     + V +     +   T+A ++K         ++ 
Sbjct: 134 TLSQADRLDELRDLLNRDLL-ANSEQINKVMDTLVRINTDQTRATNEKAANQYAGAFALV 192

Query: 239 I----AVVLIILLVIFQISRSINLQVSQLLLVIQRIAQSNDISLRAELKGNDEITAVARY 294
           I    A  ++     F ++RSI   + + L   +++A   D++     +G DE   + R 
Sbjct: 193 IGLLVAATVLTFACAFLLTRSIVKPIEEALKCAEQVADG-DLTHVIRAEGTDEAARLLRA 251

Query: 295 FNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIEQFNVQSEHMGLMATSVQQMVST 354
              + DK    +      + QL S+   ++   ++       Q+  +   AT+V +M S 
Sbjct: 252 MARMQDKLRDTLQQIAGSATQLASAAEELNAVTDESARGLQQQNNEIEQAATAVTEMTSA 311

Query: 355 ISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDLLSSTLQKSQHSIGSLNAFVEKI 414
           + E++ +     +  ++A+R+   GR +V+ TV  I+ +S  +Q +   I  L      I
Sbjct: 312 VEEVARNAVSTSEASSEASRSTGDGRDLVMETVGAIERMSGDVQATAKLITHLAEQSRDI 371

Query: 415 GGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLATRTHQSTEEITRVV 474
           G  + +I+G+A+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RT QST EI R++
Sbjct: 372 GKVLDVIRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMI 431

Query: 475 SNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQILRDMHTIQDNSQRIAAAIEEQG 534
            +IQ    + V+ +     + + TL+ +R    +L  I   +  I + +  IA+A EEQ 
Sbjct: 432 GSIQGGTEEAVESMRTSTERAESTLNIARGAGMALDTIAGAVAQINERNLVIASAAEEQA 491

Query: 535 SVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQAHAMDEAVAEFRT 584
            V   V  ++  +N +S  +   A Q       +SR A  ++  VA FRT
Sbjct: 492 QVAREVDRNLVNINDLSVQSATGAHQTSAASAELSRLAVDLNGLVARFRT 541