Pairwise Alignments

Query, 587 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  182 bits (461), Expect = 4e-50
 Identities = 121/431 (28%), Positives = 213/431 (49%), Gaps = 19/431 (4%)

Query: 154 DFHQQVLAGSANSSALNQFSDLIKSAQAVVNQAKVIGLKYNEGLLGATRSHSHDVEEMFK 213
           D  Q ++ G+A+ S L + S       A +NQ+      Y+  +   ++          +
Sbjct: 126 DVSQSMVNGTADFSRLGELS-------AQMNQS------YDGAIAAMSQFRDAQQAAFEE 172

Query: 214 AFSKTLTQAVDDKQKTMTTTKLSVTIAVVLIILLVIFQISRSINLQVSQLLLVIQRIAQS 273
           AF  T     D    ++ +T + + + V +++      I R I   +  ++  ++ IAQ 
Sbjct: 173 AFKNT-----DSANTSLISTGVILAVVVTILLFGTAVPIVRGIKQSIDDVVRSLKDIAQE 227

Query: 274 N-DISLRAELKGNDEITAVARYFNSLLDKFEHLISSSQTKSHQLYSSTSSMHDELEQVIE 332
           N D+++R E K  DEI  +  +FN  +DK + ++      S  L +   ++    E+   
Sbjct: 228 NGDLTVRIETKSEDEIGELVYWFNQFMDKLQGVVRDVVEASLPLSNLAQNLRGVTEETQR 287

Query: 333 QFNVQSEHMGLMATSVQQMVSTISEISESTNIAVDGVNQAARNAEQGRSVVVTTVKNIDL 392
             +VQ +       +V  M  ++  ++ S   A    N+A   A +GR +V  TV +I  
Sbjct: 288 TIDVQQKSATNAKRAVDTMSGSVDGVAHSAAQAASDANEATTAAREGRQIVQQTVTSIQQ 347

Query: 393 LSSTLQKSQHSIGSLNAFVEKIGGAVSIIQGIAEQTNLLALNAAIEAARAGEQGRGFAVV 452
           L+  ++++   I  L +   K+G  + +I+GIAEQTNLLALNAAIEAARAGEQGRGFAVV
Sbjct: 348 LAENVRETADVIARLESDSNKVGSVLDVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVV 407

Query: 453 ADEVRSLATRTHQSTEEITRVVSNIQSQMSQVVDDIDLCNNQGQETLSASRQLDESLQQI 512
           ADEVR+LA+RT QSTEEI   +  +Q+     V+ +     Q   ++  + +   SL+ I
Sbjct: 408 ADEVRTLASRTQQSTEEIQSTIEQLQNAAHSAVEVMSRGTEQATSSVETANKAGSSLETI 467

Query: 513 LRDMHTIQDNSQRIAAAIEEQGSVMNHVSESIAELNTISENNMRSAQQCLTEVDTVSRQA 572
              +  I   +++IA   E+Q +V   +   + E++  +E     + +  +  + ++  A
Sbjct: 468 TSTIGRINQMNEQIAHNTEDQRTVAVDIVRHVDEIHERTEQTASRSGELGSMCNELADLA 527

Query: 573 HAMDEAVAEFR 583
             ++    +FR
Sbjct: 528 QHLESIAKQFR 538