Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  142 bits (359), Expect = 2e-38
 Identities = 90/282 (31%), Positives = 155/282 (54%), Gaps = 7/282 (2%)

Query: 252 RIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESAAERVSS 311
           ++R  L R+  SA  L   A +L+  T E  + L  QN+ I+    A + + SA E V+ 
Sbjct: 258 KLRDTLQRIAGSATQLASAAEELNAVTDESARGLTQQNNEIEQAATAVNEMTSAVEEVAR 317

Query: 312 HTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQAQQVGQLMTE 371
           +  S  +          + +  +  T   ++R++   ++ A     L+++++ +G+++  
Sbjct: 318 NAVSTSEASRNATTSAGDGRDLVQETVSAIERMSGDVQATATLIGDLANESRDIGKVLDV 377

Query: 372 IGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQTSIDTMLST 431
           I G+A+QTNLLALNAAIEAARAGE GRGFAVVADEVRAL+ RTQ++T +I+  I ++ + 
Sbjct: 378 IRGLADQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQAG 437

Query: 432 IEAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQHQRELTCEV 491
            E     +  S ++ E     A      L  +   + ++      +ASAA+ Q ++  EV
Sbjct: 438 TEHAVDSMRNSTERAESTLNIAKGAGMSLDTINTAIVEINERNLVIASAAEEQAQVAREV 497

Query: 492 NQHIHSI-------ASVATQNSAATHTVEQLAMAMSGKVAEF 526
           ++++ +I       A+ A+Q SAA+  + +LA+ ++G V  F
Sbjct: 498 DRNLVNIRDLSVQSATGASQTSAASSELSRLAVDLNGMVGRF 539