Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  147 bits (370), Expect = 1e-39
 Identities = 99/295 (33%), Positives = 158/295 (53%), Gaps = 21/295 (7%)

Query: 246 LKMASARIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESA 305
           L    A +R  +  +  SA  L   A +L   T+E  + L  QN+ I     A + + +A
Sbjct: 252 LATMQANLRQTIQHIAGSATQLASAAEELSAVTEEASKGLQQQNNEIDQAATAVNEMTAA 311

Query: 306 AERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQAQQV 365
            E V+ +  S  +   Q      E +  +  T   +Q +    ++ A     L+ Q + +
Sbjct: 312 VEEVARNAVSTSEASSQSNQAAREGRDRVVETVGAIQTMTQDVQNTAAMIEGLATQGRDI 371

Query: 366 GQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQTSI 425
           G+++  I  IAEQTNLLALNAAIEAARAGE GRGFAVVADEVRAL+ RT ++TQ+    I
Sbjct: 372 GKVLDVIRAIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTAQSTQE----I 427

Query: 426 DTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIG-------EVA 478
           + M++ I+   G+   S  Q+ Q  Q   TTL+  +     +  + + I         +A
Sbjct: 428 EKMVAGIQNGTGEAVQSMQQSNQRTQ---TTLEMARAAGVALEQITQSISLINERNLVIA 484

Query: 479 SAAQHQRELTCEVNQHIHSIASVATQN-------SAATHTVEQLAMAMSGKVAEF 526
           SA++ Q +++ EV++++ +I  +ATQ+       SAA+H + +LA+ ++G VA F
Sbjct: 485 SASEEQAQVSREVDRNLVNIRDLATQSAAGANQTSAASHELSRLAVDLNGMVARF 539