Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 659 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  140 bits (353), Expect = 1e-37
 Identities = 94/308 (30%), Positives = 153/308 (49%), Gaps = 7/308 (2%)

Query: 226 DSISRLIYSGADAFSVADYHLKMASARIRTILGRMMDSARPLGELANQLHLTTQEVHQAL 285
           D   R+ Y     F      + + + +   +L ++   +R L   A++    ++     +
Sbjct: 350 DMTRRINYPTRCEFGALSRSIDILADKTGELLSQINAGSRHLVNEASRSAEISERAMARV 409

Query: 286 AAQNSNIQAVTQATDAVESAAERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLA 345
             Q S    V  A   +E +A  V+  T  A   +D+      + +  +  T +  ++LA
Sbjct: 410 QEQKSQTDQVAAAITELEVSATEVARSTDGAKDEVDRADAEAKQGRQKVATTRRITEQLA 469

Query: 346 TQAESAALTTLKLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 405
           +  ESA   T KL + +  +G ++  I GIAEQTNLLALNAAIEAARAG+ GRGFAVVAD
Sbjct: 470 SDMESAVGITHKLGEFSNNIGSILDVIRGIAEQTNLLALNAAIEAARAGDAGRGFAVVAD 529

Query: 406 EVRALSARTQRATQQIQTSIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDVEC 465
           EVRAL+ RTQ +T++IQ  I+ +  + +     +  S++QT  C +        LQ +  
Sbjct: 530 EVRALATRTQTSTEEIQHMIENLQESSKQVVEVMGRSQEQTRACVEQTREMDSALQSIAD 589

Query: 466 VMSDMLRVIGEVASAAQHQRELTCEVNQHIHSIASV-------ATQNSAATHTVEQLAMA 518
            M  +  +  +VA AAQ Q  ++  V  H+  IA V       A ++++++  +  LA  
Sbjct: 590 RMGAIKEMADQVAHAAQEQIVVSQSVAHHVTGIAEVAHETEREARESASSSEVLADLAAK 649

Query: 519 MSGKVAEF 526
               +A F
Sbjct: 650 QQQLIAHF 657