Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 518 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  267 bits (682), Expect = 8e-76
 Identities = 170/517 (32%), Positives = 275/517 (53%), Gaps = 12/517 (2%)

Query: 22  PSAQQEVLVGDHDQLVSTTDLKGVITYCNDTFCRIAGFQADELLGKNHNIVRHASMPKAA 81
           P  Q+EV    H  L+STT L   I Y +  FC +AG+  DEL+ + HN+VRH  MP  A
Sbjct: 6   PVTQKEVTYPPHFNLLSTTTLSSHIKYASKEFCDVAGYTLDELVNQPHNMVRHPDMPPEA 65

Query: 82  FADMWHHLKQGHAWRGIVKNRTKSGGFYWVDAYVTPIYQQGQLTGYQSVRVKAERKWVEI 141
           F DMW HLK G +W G+VKNR K+G  YWVDA+ +PI + G++  YQSVR+   R+ V+ 
Sbjct: 66  FKDMWEHLKAGKSWMGMVKNRCKNGDHYWVDAFASPIKENGKVVEYQSVRLCPSRQHVDN 125

Query: 142 ATKAYQALLAAEKAGKKI-QFKL-HTSLRYALLLGALMSPALAHGFQAPEQWQWLASLLP 199
           A K Y+ +    KAGK   Q K+  T L   L LG +++  ++    A +++   A L  
Sbjct: 126 ADKLYKEI----KAGKTPWQLKMPRTRLWQRLGLGFIVAAGVSF---AADRFFAGAGLPL 178

Query: 200 AGVLGLLFRQELVRTPQQLKQWQNEY--DSISRLIYSG-ADAFSVADYHLKMASARIRTI 256
             VL +L   +  R  + L Q   +   + +  L+Y+G  D  S     +KM  + +  +
Sbjct: 179 MLVLTILMAYQFTRRLETLSQEARKVFDNPLMELVYNGRVDDLSEIQLAMKMRQSELNAV 238

Query: 257 LGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESAAERVSSHTHSA 316
           +GR+ DS+  +GE A      +      L AQ    + +  A   +   A  ++ +  +A
Sbjct: 239 VGRIQDSSIQIGEAAKMSSQNSATTADNLDAQTRETEQLATAITQMNITATEIAHNAQAA 298

Query: 317 HQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQAQQVGQLMTEIGGIA 376
                  ++   +  H++  T   +  +A+Q ++A+    +LS Q+  +GQ+M  I  IA
Sbjct: 299 SDATVHAKNAARDGMHAVEQTVDAIGEMASQMKTASSVIEQLSSQSAMIGQVMEVIQSIA 358

Query: 377 EQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQTSIDTMLSTIEAWR 436
           EQTNLLALNAAIEAARAG+QGRGFAVVADEVR L+ R+  +T++IQ  I ++ ++     
Sbjct: 359 EQTNLLALNAAIEAARAGDQGRGFAVVADEVRKLAQRSTESTKEIQEVITSIQTSTRNAV 418

Query: 437 GDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQHQRELTCEVNQHIH 496
             I      +  C  +A+ +  +L  +   +SD+     ++A+A +    +T ++N+ + 
Sbjct: 419 ETIEQGNKLSVSCVDNAHLSGDKLTALLSQVSDITMRNEQIATAIEEMANVTEDMNRSVQ 478

Query: 497 SIASVATQNSAATHTVEQLAMAMSGKVAEFGALSKQF 533
           SI+ V+T+        +     ++  +A+  +L  QF
Sbjct: 479 SISDVSTETLGLAENTQNECRQLAHNLAQQTSLVAQF 515