Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 643 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  132 bits (333), Expect = 3e-35
 Identities = 87/308 (28%), Positives = 155/308 (50%), Gaps = 14/308 (4%)

Query: 222 QNEYDSISRLIYSGADAFSVADYHLKMASARIRTILGRMMDSARPLGELANQLHLTTQEV 281
           Q   D   RL  +G D  +         S  ++ ++ ++ D+ + +     QL  T +E 
Sbjct: 329 QGSGDLTRRLEVNGNDDLAQISEGFNRFSGNLQNMMLQISDATQIISSSIEQLSQTAKEN 388

Query: 282 HQALAAQNSNIQAVTQATDAVESAAERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNL 341
            Q L + +S    V  A   +  +A  V+     ++Q+ +       ++   +N     +
Sbjct: 389 EQMLISHSSETDQVVTAITQMSESARTVAESVTQSNQITEAASKEAQQSLVIVNNAVSTV 448

Query: 342 QRLATQAESAALTTLKLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFA 401
             L    E+ + +   ++  A ++ ++++ IG I+EQTNLLALNAAIEAARAGEQGRGFA
Sbjct: 449 TSLVNDVENMSESISNMNRDANKISEVLSVIGAISEQTNLLALNAAIEAARAGEQGRGFA 508

Query: 402 VVADEVRALSARTQRATQQIQTSIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQ 461
           VVADEVRAL+ARTQ +T +I   +  +L   ++  G +  ++ Q +  A   +     L 
Sbjct: 509 VVADEVRALAARTQNSTTEISDMLTKLLEGTDSVVGAMERTKQQCQTTADKTSEVSGSLN 568

Query: 462 DVECVMSDMLRVIGEVASAAQHQRELTCEVNQHIHSIASV-------------ATQN-SA 507
            +   +SD+  +  ++A+A + Q  +  E+++++ SI  +             AT++ S 
Sbjct: 569 MMSASVSDIDDLSTQIAAATEQQSTVAAELSRNMLSIREIVESLVVSGRQTVGATESLSH 628

Query: 508 ATHTVEQL 515
           + H +EQL
Sbjct: 629 SNHELEQL 636