Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 578 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  144 bits (364), Expect = 7e-39
 Identities = 98/315 (31%), Positives = 165/315 (52%), Gaps = 13/315 (4%)

Query: 222 QNEYDSISRLIYSGADAFSVADYHLKMASARIRTILGRMMDSARPLGELANQLHLTTQEV 281
           Q   D   RL     D        + +   +++ +   + DS++ +      +HL+ Q  
Sbjct: 264 QGNGDLTQRLAVESKDEIGQICNSINLFIEKLQQMFIDVADSSKEIDRAV--VHLSNQ-A 320

Query: 282 HQALAAQNSNIQAVTQATDAVESAAERVSSHTHSAHQ---LIDQVQDHCAETKHSINVTH 338
              L   N + Q   QA  A+E  +    S   SA     L ++   +  E+K ++    
Sbjct: 321 RSNLNTLNQHTQETEQAITAIEEMSASAGSIAQSADDAALLTERTNRYADESKQTVTEAV 380

Query: 339 QNLQRLATQAESAALTTLKLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGR 398
            ++  L  Q  S A T  ++S+  +Q+  ++  IG IAEQTNLLALNAAIEAARAGEQGR
Sbjct: 381 NSVNGLVNQVSSMAETITRMSEDTKQINSVLQVIGAIAEQTNLLALNAAIEAARAGEQGR 440

Query: 399 GFAVVADEVRALSARTQRATQQIQTSIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQ 458
           GFAVVADEVRAL++RTQ++T QI   + T+ +T E    ++ ++R   E+ A+  N  + 
Sbjct: 441 GFAVVADEVRALASRTQQSTSQINDMLATLKTTTENVVKEMDSTRIHCEETAERTNHVMD 500

Query: 459 QLQDVECVMSDMLRVIGEVASAAQHQRELTCEVNQHIHSIASV-------ATQNSAATHT 511
            L  V   +++M  +   +A++A  QR++T EV++++ +I  +       A Q ++ ++ 
Sbjct: 501 SLNVVTDSVAEMNNLNTLIATSAMEQRQVTHEVSKNMAAIQEMVRKLNMNAAQVTSVSNE 560

Query: 512 VEQLAMAMSGKVAEF 526
           ++  + A+S  V  F
Sbjct: 561 LQNTSHALSDVVGRF 575