Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  254 bits (649), Expect = 6e-72
 Identities = 168/533 (31%), Positives = 263/533 (49%), Gaps = 33/533 (6%)

Query: 22  PSAQQEVLVGDHDQLVSTTDLKGVITYCNDTFCRIAGFQADELLGKNHNIVRHASMPKAA 81
           P     + +     ++STT     ITY N  F +I+GF  +EL+G+ HN+VRH  MP AA
Sbjct: 10  PVTGHNIELSSSTNILSTTTPDSHITYVNPDFLKISGFAEEELIGQPHNMVRHPDMPPAA 69

Query: 82  FADMWHHLKQGHAWRGIVKNRTKSGGFYWVDAYVTPIYQQGQLTGYQSVRVKAERKWVEI 141
           FA MW  LK G +W G+VKNR K+G  YWV A+  PI + G++  YQSVR K E   V+ 
Sbjct: 70  FAHMWSTLKSGRSWMGLVKNRCKNGDHYWVSAFAMPIIKNGKVVEYQSVRTKPEPSHVQA 129

Query: 142 ATKAYQALLAAEKAGKKIQFKLHTSLRYALLLGALMSPALAHGFQAPEQWQWLA--SLLP 199
           A KAY  L   +    KI+   H  L   L+ G+L +         P     +   +LL 
Sbjct: 130 AEKAYAQLRNGKNILPKIRLGFHWKL-ILLVWGSLFASIAIVSLIYPSALMSILFLTLLV 188

Query: 200 AGVLGLLFRQELVRTPQQLKQWQNEYDS-ISRLIYSG-ADAFSVADYHLKMASARIRTIL 257
             +  L     LV   + ++ +  + D+ +S+++Y+G +D F   ++ L+MA A    ++
Sbjct: 189 GSITTLGITYLLVPMKRLIQSYCKDSDNPLSQVLYTGRSDEFGQLEFALRMAQAETSAVI 248

Query: 258 GRMMDSARPLGELANQL--------------HLTTQEVHQALAAQNSNIQAVTQATDAVE 303
           GR+ D++  L + AN L                 T++V  A+    ++IQ V        
Sbjct: 249 GRIGDASNQLNKFANDLLHNIEKSNILTSEQQAETEQVATAINEMAASIQEVATGAKHAA 308

Query: 304 SAAERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQAQ 363
           +++E  +  T S  Q++ Q      E +H ++   Q +               +L + + 
Sbjct: 309 NSSESANHETISGQQIVSQASQSITELEHEVSQAKQVIH--------------ELEEHSN 354

Query: 364 QVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQT 423
            + +++  I  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR L+ARTQ++T  IQ 
Sbjct: 355 DISKVLEVIRSIADQTNLLALNAAIEAARAGESGRGFAVVADEVRGLAARTQQSTMDIQR 414

Query: 424 SIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQH 483
            IDT+    +     +  S  Q     + A      L  +   +SD+  +  ++A+A   
Sbjct: 415 MIDTLQGRAKLAVAVMEHSSQQALLSVEQAQQAADALTGIGKRVSDITGMSVQMATAVDQ 474

Query: 484 QRELTCEVNQHIHSIASVATQNSAATHTVEQLAMAMSGKVAEFGALSKQFAQK 536
           Q  ++ E+N  I +I   A  N        + A  ++G       L++QF ++
Sbjct: 475 QSAVSDEINHSISNIRMAADTNVDNGKINAKCAEGVAGLSHNLSELAQQFWER 527