Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  137 bits (344), Expect = 1e-36
 Identities = 99/353 (28%), Positives = 169/353 (47%), Gaps = 13/353 (3%)

Query: 194 LASLLPAGVLGLLFR--QELVRTPQQLKQWQNEYDSISRLIYSGADAFSVADYHLKMASA 251
           + S +   V+GL+F      V   + +   Q+   S+  +   G D  +      +    
Sbjct: 210 MISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIKVESQDEIG 269

Query: 252 RIRTILGRMMDSARPL----GELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESA-- 305
            +       MD   PL       AN +    QE+ Q  +  +  +      TD V +A  
Sbjct: 270 DVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVT 329

Query: 306 -----AERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSD 360
                A  V+S+T+S  Q I+      A  +  +N+    +  L  +    +     LS 
Sbjct: 330 EMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQ 389

Query: 361 QAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQ 420
           QA ++ Q++  IG IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+L++RTQ +T++
Sbjct: 390 QAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKE 449

Query: 421 IQTSIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASA 480
           I   ++ +   +      +  S+++ E+ A ++    + L  +   +S +  +  + ASA
Sbjct: 450 IGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASA 509

Query: 481 AQHQRELTCEVNQHIHSIASVATQNSAATHTVEQLAMAMSGKVAEFGALSKQF 533
           A+ Q  +  ++NQ++ +I  +  + S +    E ++ ++S    + G L   F
Sbjct: 510 AEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHF 562