Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 550 a.a., aromatic acid chemoreceptor from Pseudomonas putida KT2440

 Score =  140 bits (354), Expect = 9e-38
 Identities = 84/280 (30%), Positives = 152/280 (54%)

Query: 254 RTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESAAERVSSHT 313
           R  LG++ + AR L   A  L+  T+E    L  Q   ++    A   + +A E V+ + 
Sbjct: 269 RDTLGQINNCARQLDAAATALNAVTEESANNLRQQGQELEQAATAVTEMTTAVEEVARNA 328

Query: 314 HSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQAQQVGQLMTEIG 373
            +  Q   +     A+++  ++      + +  + ++++    +L  Q + +G+++  I 
Sbjct: 329 ITTSQTTSESNQLAAQSRRQVSENIDGTEAMTREIQTSSAHLQQLVGQVRDIGKVLEVIR 388

Query: 374 GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQTSIDTMLSTIE 433
            ++EQTNLLALNAAIEAARAGE GRGFAVVADEVR L+ RTQ++TQ+I+  I ++ +  E
Sbjct: 389 SVSEQTNLLALNAAIEAARAGEAGRGFAVVADEVRTLAYRTQQSTQEIEQMIGSVQAGTE 448

Query: 434 AWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQHQRELTCEVNQ 493
           A    + AS ++ +        + Q L+ +   + ++      +ASAA+ Q ++  EV++
Sbjct: 449 AAVASMQASTNRAQSTLDVTLASGQVLEGIYSAIGEINERNLVIASAAEEQAQVAREVDR 508

Query: 494 HIHSIASVATQNSAATHTVEQLAMAMSGKVAEFGALSKQF 533
           ++ +I  ++  ++A      + + A+SG V E  AL  +F
Sbjct: 509 NLLNIRELSNHSAAGAQQTSEASKALSGLVGEMTALVGRF 548



 Score = 30.0 bits (66), Expect = 2e-04
 Identities = 50/246 (20%), Positives = 94/246 (38%), Gaps = 17/246 (6%)

Query: 254 RTILGRMMDSARP--LGELANQLHLTTQEVHQALAAQN--SNIQAVTQATDAVESAAERV 309
           + ++   +++AR   L  LA +L  T  E  +A+A Q   +  +++ Q       A   +
Sbjct: 106 QALVDEFVENAREPALRGLATELQATFAEYAKAVAGQREATRQRSLEQYFKVNSDAGNAM 165

Query: 310 SSHTHSAHQLIDQVQDHCAET--KHSINVTHQNLQRLATQAESAALTTLKLSDQAQQVGQ 367
                   QL+  + +   +   +    +    L  L     +  L  L  +  AQ+V  
Sbjct: 166 GRLQTLRQQLVTTLSERGQQIMLESDRRLARAQLLSLCLLGVTVVLAVLCWAFIAQRVLH 225

Query: 368 LMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQTSIDT 427
            + E GG   +     L+  +       QG+G     +E+  L    QR  Q  + ++  
Sbjct: 226 PLREAGGHFRRIASGDLSVPV-------QGQG----NNEIGQLFHELQRMQQSQRDTLGQ 274

Query: 428 MLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQHQREL 487
           + +         TA    TE+ A +     Q+L+     +++M   + EVA  A    + 
Sbjct: 275 INNCARQLDAAATALNAVTEESANNLRQQGQELEQAATAVTEMTTAVEEVARNAITTSQT 334

Query: 488 TCEVNQ 493
           T E NQ
Sbjct: 335 TSESNQ 340