Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., putative aerotaxis receptor from Pseudomonas putida KT2440

 Score =  245 bits (625), Expect = 3e-69
 Identities = 181/521 (34%), Positives = 259/521 (49%), Gaps = 38/521 (7%)

Query: 33  HDQLVSTTDLKGVITYCNDTFCRIAGFQADELLGKNHNIVRHASMPKAAFADMWHHLKQG 92
           H +L+S TD   +ITYCN  F  I+G+   EL+G  HN+VRH  MP A +  MW +LK G
Sbjct: 17  HQRLISATDTASLITYCNPEFAAISGYSEAELIGSPHNLVRHPDMPPAVYELMWRYLKAG 76

Query: 93  HAWRGIVKNRTKSGGFYWVDAYVTPIYQQGQLTGYQSVRVKAERKWVEIATKAYQALLAA 152
            +W GIVKNR ++G +YWV+AYVTPI + G++ GY+SVRV   R+ V  A   Y  L   
Sbjct: 77  KSWMGIVKNRCRNGDYYWVNAYVTPILEGGRVVGYESVRVCPTREQVARAEALYARLRNG 136

Query: 153 EKAGKKIQFKLHTSLRYALLLGALMSPALAHGFQAPEQWQWLASLLPAGV-------LGL 205
           + A       L    R +LL  AL  P LA G  A         L+  G+        GL
Sbjct: 137 QAA-------LSAPRRLSLLAQALALP-LAGGLLAVGANHLWPGLVGQGLTLGLFVACGL 188

Query: 206 LFRQELVRTPQQLKQWQNE--YDSISRLIYSG-ADAFSVADYHLKMASARIRTILGRMMD 262
             R  L R  QQ+ Q       D I+ L YS  + A       L    AR++T L R+ D
Sbjct: 189 WVRNALGRQLQQIVQGAEGAFADPIAALTYSDLSGAAGQLQLMLISEEARLKTALTRLSD 248

Query: 263 SARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESAAERVSSH-------THS 315
            A  +   A      ++    AL  Q +       A + + ++   V++H        H+
Sbjct: 249 LAGQMAVAARDAGQLSRSTEAALLEQRAETDLSATAMNQMAASIGEVANHVQLTAAEAHT 308

Query: 316 AHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQAQQVGQLMTEIGGI 375
           AH L +Q     ++   +     +NL    TQ   A      L+ Q   + +    I GI
Sbjct: 309 AHLLAEQ----GSQVADASGAAIRNLASTVTQINQA---VSHLAGQTGAIAEAAGMIRGI 361

Query: 376 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQTSIDTMLSTIEAW 435
           AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRAL+ +T+++T  IQ  ID + S  E  
Sbjct: 362 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALADKTRQSTLHIQAIIDALRSGAEEA 421

Query: 436 RGDITASRDQTEQ---CAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQHQRELTCEVN 492
               +   D  EQ     Q+A   L  ++D    +SDM +   ++A+A+Q Q  +  +V+
Sbjct: 422 VAIASRGIDGAEQGVAQVQEARQALHGIRDAVQRISDMSQ---QMATASQQQSAVAEDVS 478

Query: 493 QHIHSIASVATQNSAATHTVEQLAMAMSGKVAEFGALSKQF 533
           + I+ +A +A  ++ + +        +    A   AL ++F
Sbjct: 479 RQINGVAGIAQHSAHSANAAASRGTELEHVCAGLRALVERF 519