Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., hypothetical protein from Pseudomonas lactucae CFBP13502

 Score =  139 bits (351), Expect = 2e-37
 Identities = 94/303 (31%), Positives = 159/303 (52%), Gaps = 6/303 (1%)

Query: 234 SGADAFSVADYHLKMASARIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQ 293
           SG D  +     L      +R  + ++ DS+  L   A ++   T+E  + L +QN  + 
Sbjct: 238 SGKDEAARLLKALAQMQENLRKTIMQISDSSTQLASAAEEMTAVTEESSRGLVSQNDEVN 297

Query: 294 AVTQATDAVESAAERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAAL 353
               A   + +A + V+ +  SA +   + Q         +  T +++++L+   ++ + 
Sbjct: 298 QAATAVTEMSAAVDEVARNAESASEESRRTQGFTETGLERVAQTLKSIEKLSGNVDTTSD 357

Query: 354 TTLKLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSAR 413
               LS +AQ + +++  I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRAL+ R
Sbjct: 358 KIQVLSQRAQSINKVVEVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHR 417

Query: 414 TQRATQQIQTSIDTMLSTIEAWRGDITASRD---QTEQCAQDANTTLQQLQDVECVMSDM 470
           TQ +TQ+I+  I  M S        ++ S++   Q+   AQ+A+++L Q+      +++ 
Sbjct: 418 TQSSTQEIEQMISAMQSDSAEAVEAMSKSKELATQSLDVAQEASSSLDQIAKAITQINER 477

Query: 471 LRVIGEVASAAQHQRELTCEVNQHIHSIASVATQNSAATHTVEQLAMAMSGKVAEFGALS 530
             +I   A+A++ Q  +  EV++++ SI  +A Q+SA           MS    +   + 
Sbjct: 478 NTLI---ATASEEQAHVAREVDRNLVSIRELAVQSSAGASQTASACGEMSKLAVDLNRMV 534

Query: 531 KQF 533
            +F
Sbjct: 535 NRF 537