Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein McpP from Pseudomonas lactucae CFBP13502

 Score =  144 bits (362), Expect = 1e-38
 Identities = 104/352 (29%), Positives = 171/352 (48%), Gaps = 18/352 (5%)

Query: 193 WLASLLPAG---VLGLLFRQELVRTPQQLKQWQN--------EYDSISRLIYSGADAFSV 241
           W AS +  G   V+GLL         Q L+   N        E D    L   G D  + 
Sbjct: 191 WKASFILLGIALVMGLLVALIARSIVQPLQAAVNAMGNIASGESDLTRSLETHGRDEVTQ 250

Query: 242 ADYHLKMASARIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDA 301
              H    +A++R ++G++   A  LGE + +L     + H+    Q+  ++ V  A + 
Sbjct: 251 LSQHFNSFTAKLRQVVGQLQACANALGESSTELGNNASQAHERSQQQSQQMELVATAINE 310

Query: 302 VESAAERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQ 361
           V    + V+ +   A   + + +    + + +I+ + Q + +L+     A      LS +
Sbjct: 311 VTYGVQDVAKNAEHAASEMREAEAQAQQGQVNIDGSLQQIDQLSNTISQAVEVIRTLSSE 370

Query: 362 AQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQI 421
           + Q+G ++  I  IA+QTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RTQ++T +I
Sbjct: 371 STQIGGVLEVIRSIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKSTAEI 430

Query: 422 QTSIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAA 481
           Q  I+ +    EA    I+ S   ++   + A      L  +   + ++  +   +ASA 
Sbjct: 431 QLMIERLQGHSEAAVKVISDSHSASQLTIEQAGQAGASLTAIGQALRNLNGLNASIASAT 490

Query: 482 QHQRELTCEVNQHI-------HSIASVATQNSAATHTVEQLAMAMSGKVAEF 526
             Q  +  ++NQ++       HS A  A Q+S A+  +  L+  + G + +F
Sbjct: 491 LQQAHVVEDINQNVTEAAGLSHSTAIAAEQSSLASAQLRGLSEQLDGLLRQF 542