Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 528 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  215 bits (548), Expect = 3e-60
 Identities = 157/532 (29%), Positives = 244/532 (45%), Gaps = 59/532 (11%)

Query: 22  PSAQQEVLVGDHDQLVSTTDLKGVITYCNDTFCRIAGFQADELLGKNHNIVRHASMPKAA 81
           P    E ++ +   LVSTTDL+  ITYCN  F  ++GF+ DELLG+ HNIVRH  MP  A
Sbjct: 6   PVTHNEFVIPEGVTLVSTTDLQSRITYCNPAFVAVSGFERDELLGQPHNIVRHPDMPAEA 65

Query: 82  FADMWHHLKQGHAWRGIVKNRTKSGGFYWVDAYVTPIYQQGQLTGYQSVRVKAERKWVEI 141
           F DMW  L  G  W  +VKNR K+G  YWV+A  TP+ + GQ  GY SVR    R  V+ 
Sbjct: 66  FRDMWATLASGSPWSALVKNRRKNGDHYWVEANATPVLENGQTVGYMSVRTAPTRDQVKQ 125

Query: 142 ATKAYQALLAAEKAGK-------------------KIQFKLHTSLRYALLLGALMSPALA 182
           A   Y  +   +  G+                   +   +L    R AL    + +  L 
Sbjct: 126 AEALYARMRGEQGEGRVALSLRQGRVVQSGTIGRLRDMARLTLGKRVALCSVGMAAAGLV 185

Query: 183 HG------FQAPEQWQWLASLLPAGVLGLLFRQELVRTPQQLKQWQNEY---DSISRLIY 233
            G        A       A L  A    LL RQ+++   Q+   + N+    D  +R   
Sbjct: 186 TGELAAPYGAAAHVGAGAALLAVASAAALLLRQQMLTPLQRAVAFANQMAAGDLSARFQG 245

Query: 234 SGADAFSVADYHLKMASARIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQ 293
                F      L   +  ++ ++  +      +   ++Q+    Q++     +Q S+++
Sbjct: 246 HANGEFGELTKALNQLNVNLQAVVADVRHEVEGVQVASSQIAAGNQDLSSRTESQASSLE 305

Query: 294 AVTQATDAVESAAERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAAL 353
               + + + S  ++ ++ +  A  L          ++ S +V  +    +A        
Sbjct: 306 QTAASVEELSSTVQQSANASREASVL----------SQRSASVAREGNDAMARVIH---- 351

Query: 354 TTLKLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSAR 413
           T   +S  + ++G+++  I GIA QTN+LALNAA+EAARAGEQGRGFAVVA EVR+L+ R
Sbjct: 352 TMDDISRSSNRIGEIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVAGEVRSLAQR 411

Query: 414 TQRATQQIQTSIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRV 473
           T  A+++I+  ID          G + A  +      +     +Q ++ V  +++D    
Sbjct: 412 TMTASKEIKALIDES-------TGQVAAGSELVHSTGKTMTEVVQSVEQVNGLIAD---- 460

Query: 474 IGEVASAAQHQRELTCEVNQHIHSIASVATQNSAATHTVEQLAMAMSGKVAE 525
              +  A Q Q     ++NQ +  + SV  QNSA    VEQLA A     A+
Sbjct: 461 ---ITHATQEQALGLGQINQAVGQLDSVTQQNSA---MVEQLAAAAGSLQAQ 506