Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., fused signal transducer for aerotaxis sensory component/methyl accepting chemotaxis component (NCBI) from Escherichia coli BW25113

 Score =  209 bits (533), Expect = 2e-58
 Identities = 160/517 (30%), Positives = 243/517 (47%), Gaps = 71/517 (13%)

Query: 17  MSAYTPSAQQEVLVGDHDQLVSTTDLKGVITYCNDTFCRIAGFQADELLGKNHNIVRHAS 76
           MS++    QQ   + D   L+STTDL+  IT+ NDTF +++G+   EL G+ HN+VRH  
Sbjct: 1   MSSHPYVTQQNTPLADDTTLMSTTDLQSYITHANDTFVQVSGYTLQELQGQPHNMVRHPD 60

Query: 77  MPKAAFADMWHHLKQGHAWRGIVKNRTKSGGFYWVDAYVTPIYQQGQLTGYQSVRVKAER 136
           MPKAAFADMW  LK+G  W GIVKNR K+G  YWV A   P+ ++G+++GY S+R +A  
Sbjct: 61  MPKAAFADMWFTLKKGEPWSGIVKNRRKNGDHYWVRANAVPMVREGKISGYMSIRTRATD 120

Query: 137 KWVEIATKAYQALLAAEKA--------------GKKIQFKLHTSLRYALLLGALMSPALA 182
           + +      Y+AL A   +              GK     L    R  + L  ++  A+ 
Sbjct: 121 EEIAAVEPLYKALNAGRTSKRIHKGLVVRKGWLGKLPSLPLRWRARGVMTLMFILLAAML 180

Query: 183 HGFQAPEQWQWLASLLPAGVLGLLFRQELVR-----TPQQLKQWQNEYDSISRLIYS--- 234
               AP     L +L+   +    F  ++VR       Q LK    E +S+  L  S   
Sbjct: 181 WFVAAPVVTYILCALVVL-LASACFEWQIVRPIENVAHQALKVATGERNSVEHLNRSDEL 239

Query: 235 GADAFSVADYHLKM------ASARIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQ 288
           G    +V    L         S+++ ++       A+   EL      T   V Q +A  
Sbjct: 240 GLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSETLAKGTDELNEHTQQTVDNVQQTVATM 299

Query: 289 NSNIQAVTQATDAVESAAERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQA 348
           N    +V Q   A  SAA+++S                         +T  N      +A
Sbjct: 300 NQMAASVKQ-NSATASAADKLS-------------------------ITASNAAVQGGEA 333

Query: 349 ESAALTTL-KLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 407
            +  + T+  ++D  Q++G + + I  IA QTN+LALNAA+EAARAGEQG+GFAVVA EV
Sbjct: 334 MTTVIKTMDDIADSTQRIGTITSLINDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEV 393

Query: 408 RALSARTQRATQQIQTSIDTMLSTIEAWRGDITAS-----------RDQTEQCAQDANTT 456
           R L++R+  A   I+  ID     +++    + A+           ++ T+  AQ +++T
Sbjct: 394 RHLASRSANAANDIRKLIDASADKVQSGSQQVHAAGRTMEDIVAQVKNVTQLIAQISHST 453

Query: 457 LQQLQDVECVMSDMLRVIGEVASAAQHQRELTCEVNQ 493
           L+Q       +S + R + E+    Q   EL  E  Q
Sbjct: 454 LEQADG----LSSLTRAVDELNLITQKNAELVEESAQ 486