Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 515 a.a., PAS domain-containing protein from Dickeya dianthicola ME23

 Score =  196 bits (497), Expect = 2e-54
 Identities = 149/536 (27%), Positives = 242/536 (45%), Gaps = 75/536 (13%)

Query: 22  PSAQQEVLVGDHDQLVSTTDLKGVITYCNDTFCRIAGFQADELLGKNHNIVRHASMPKAA 81
           P  Q+E +      L+S TD+   I Y ND F +++GF+ DE+ G+ HN VRH  MP  A
Sbjct: 6   PVTQREYIFDKDATLMSVTDVNSHIVYANDAFIQVSGFEPDEIDGQPHNFVRHPDMPVEA 65

Query: 82  FADMWHHLKQGHAWRGIVKNRTKSGGFYWVDAYVTPIYQQGQLTGYQSVRVKAERKWVEI 141
           F DMW  LKQ   W  +VKNR K+G  YWV A   PI +QG+ TGY SVR +  R+ V+ 
Sbjct: 66  FRDMWQTLKQQEPWTALVKNRRKNGDHYWVRANAVPIVRQGRTTGYMSVRTQPSRQEVDA 125

Query: 142 ATKAYQALLAAE----KAGKKIQFK--------------LHTSLRYALLLGALMSPAL-- 181
           A   YQ++   +    K  K + F+              +   LR  ++L AL+S  +  
Sbjct: 126 AEALYQSMRHDQGKNLKLHKGVLFRAGLTGLFSRLKLISIRWRLRGLIMLTALISYVVFW 185

Query: 182 -AHGFQAPEQWQWLASLLPAGVLGL---LFRQELVRTPQQLKQWQNEYDSISRLIYSGAD 237
             HG    +   +++S    G++ L   L   +L++  + +KQ                 
Sbjct: 186 TIHGNVDAD--FYISSAFMTGMMLLLDGLLEWQLIKPIEMVKQ----------------- 226

Query: 238 AFSVADYHLKMASARIRTI-LGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVT 296
                   L +A+  + TI  G   D    +     QL L  + +   ++ Q  NI++  
Sbjct: 227 ------QALNIATGNVNTIDYGNHADEIGTIQRAIGQLGLMFRWLVDDISTQVLNIRS-- 278

Query: 297 QATDAVESAAERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTL 356
            A+D +   +E +S H       + Q     A   + IN T Q      ++A   A T  
Sbjct: 279 -ASDELAHGSEDMSDHAERTAANVQQT----AAAMNQINTTVQTNTTTTSEASQQAATAC 333

Query: 357 ------------------KLSDQAQQVGQLMTEIGGIAEQTNLLALNAAIEAARAGEQGR 398
                              +   ++++  + + I  IA QTN+LALNAA+EAARAGEQG+
Sbjct: 334 DAAISGGRVIGEMEKTMDSIVASSEKIAGITSIIDNIAFQTNILALNAAVEAARAGEQGK 393

Query: 399 GFAVVADEVRALSARTQRATQQIQTSIDTMLSTIEAWRGDITASRDQTEQCAQDANTTLQ 458
           GFAVVA EVR+L+ R+  A  +I+  I++ +  +      +  + D T+      N+  Q
Sbjct: 394 GFAVVAGEVRSLAQRSASAANEIKQLIESSVEQVRYGSTHVRDAGDSTQNIVTRVNSVSQ 453

Query: 459 QLQDVECVMSDMLRVIGEVASAAQHQRELTCEVNQHIHSIASVATQNSAATHTVEQ 514
            +  +     +    + E+  A +   ++T +    +++ A  + Q     H +EQ
Sbjct: 454 LISHIADSTKEQTIGLSEIGRAVEELEQITQKNASQVNACAQASDQLKLQAHRLEQ 509