Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., Aerotaxis receptor from Alteromonas macleodii MIT1002

 Score =  252 bits (643), Expect = 3e-71
 Identities = 167/503 (33%), Positives = 251/503 (49%), Gaps = 28/503 (5%)

Query: 22  PSAQQEVLVGDHDQLVSTTDLKGVITYCNDTFCRIAGFQADELLGKNHNIVRHASMPKAA 81
           P  Q+E     H +L+S+TD +GVI +CN  F   +GF  +EL+GKNHNI+RH  MP   
Sbjct: 6   PVTQKEYKFPAHHRLISSTDKRGVIQHCNSAFVEASGFSREELIGKNHNIIRHPDMPAPV 65

Query: 82  FADMWHHLKQGHAWRGIVKNRTKSGGFYWVDAYVTPIYQQGQLTGYQSVRVKAERKWVEI 141
           F +MW  L+ G +W G+VKNR K+G  YWV A+VTP+Y+   + GY+SVRV A    +  
Sbjct: 66  FKEMWRTLESGQSWIGLVKNRRKNGDHYWVSAFVTPVYEGKSVVGYESVRVPALNDEIAR 125

Query: 142 ATKAYQALLAAEKA----GKKIQFKLHTSLRYALLLGALMSPALA--HGFQAPEQWQWLA 195
           A+  Y  +   + A     +  Q  +H  L   LL+ A++  ALA  HG  A       A
Sbjct: 126 ASSVYARMQEGKSAVSPMSRLAQNLMH--LAPTLLISAVLVIALAFTHGAAA-------A 176

Query: 196 SLLPAGVLGLLFRQELVRTPQ-----QLKQWQNEYDSISRLIYSGADAFSVADYHLKMAS 250
            +   G + L+  QE            L       +++++  +      S A   L    
Sbjct: 177 GIALLGAIVLMIAQEAKTRKDWGALLSLSPESYANETVAQTYFPDPPHISQAKLALGCEL 236

Query: 251 ARIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQ----AVTQATDAVESAA 306
           AR RT L R+ D++  L  +AN  H   +    A+  QN   Q    AVTQ + A++  A
Sbjct: 237 ARNRTALTRIKDASAGLESIANTTHEQAESTSAAVVQQNQATQQIASAVTQMSQAIQEVA 296

Query: 307 ERVSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQAQQVG 366
           ERV S+  SA      V+    + + ++    Q +  L    ES + T  +L+     +G
Sbjct: 297 ERVESNAKSARTAASNVETGNQKAEQAM----QAIVALREAVESISTTVTELAQSTSDIG 352

Query: 367 QLMTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQTSID 426
           +    I  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L+++T+ +T +I   I+
Sbjct: 353 EAANIISTIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASKTRESTDKIHNIIN 412

Query: 427 TMLSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQHQRE 486
            +    +      T      E  +     T   L ++   +  +     E++SA + Q  
Sbjct: 413 ELAERSDRAVRVSTEGLASAEHGSAIVEETRGALFEINNAVKGIADATVEMSSAVEEQST 472

Query: 487 LTCEVNQHIHSIASVATQNSAAT 509
           +   +NQ +  +A  A++   ++
Sbjct: 473 VAEHINQQLVEVADGASETQRSS 495



 Score = 28.5 bits (62), Expect = 6e-04
 Identities = 23/90 (25%), Positives = 37/90 (41%), Gaps = 1/90 (1%)

Query: 436 RGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQHQRELTCEVNQHI 495
           R  +T  +D +      ANTT +Q +     +    +   ++ASA     +   EV + +
Sbjct: 240 RTALTRIKDASAGLESIANTTHEQAESTSAAVVQQNQATQQIASAVTQMSQAIQEVAERV 299

Query: 496 HSIASVATQNSAATHTVEQLA-MAMSGKVA 524
            S A  A   ++   T  Q A  AM   VA
Sbjct: 300 ESNAKSARTAASNVETGNQKAEQAMQAIVA 329