Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., Methyl-accepting chemotaxis protein 4 from Alteromonas macleodii MIT1002

 Score =  143 bits (361), Expect = 1e-38
 Identities = 95/330 (28%), Positives = 171/330 (51%), Gaps = 8/330 (2%)

Query: 194 LASLLPAGVLGLLFRQELVRTPQQLKQW-----QNEYDSISRLIYSGADAFSVADYHLKM 248
           L S++   VL  +    +V+  Q++ +      Q E D    L  +G D  +    +   
Sbjct: 194 LVSIVLVVVLVYVIGGSIVKPVQEVSERMKDISQGEGDLTRSLPETGQDEVTRLARYFNE 253

Query: 249 ASARIRTILGRMMDSARPLGELANQLHLTTQEVHQALAAQNSNIQAVTQATDAVESAAER 308
            + ++R  L  + ++   L + A  +  +++  +     QN N+  V  A + + +    
Sbjct: 254 YTEKMRHSLLGIRENINSLTQQAELVETSSKNSNAQAQTQNENMLQVAAAMEEMTTQINE 313

Query: 309 VSSHTHSAHQLIDQVQDHCAETKHSINVTHQNLQRLATQAESAALTTLKLSDQAQQVGQL 368
           VS++  SA +     + +       ++ T  +++ L +  ES +    +L+ Q + +G +
Sbjct: 314 VSNNADSAEKSTSSARGNVQNGASVVDSTVNDIRSLTSDIESVSSAVTELAAQTESIGAV 373

Query: 369 MTEIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALSARTQRATQQIQTSIDTM 428
           +  I GIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR L++RT ++T +IQ  I+ +
Sbjct: 374 LDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTGQSTDEIQAMIEKL 433

Query: 429 LSTIEAWRGDITASRDQTEQCAQDANTTLQQLQDVECVMSDMLRVIGEVASAAQHQRELT 488
            S  ++    +  S+  + +   +A    Q LQ+ + +M+++  +  E+A A + Q E  
Sbjct: 434 QSNAKSAVDAVKVSQSASTKTVDNAIQANQNLQEADRLMTEIADMSSEIARATEQQAEAA 493

Query: 489 CEVNQHIHSIASVATQNSAATHTVEQLAMA 518
            E N  I++++  A    ++  T ++LA A
Sbjct: 494 TEANMRINALSGAA---DSSLRTADELAAA 520