Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 350 a.a., HTH-type transcriptional regulator GntR from Xanthobacter sp. DMC5

 Score =  130 bits (327), Expect = 5e-35
 Identities = 97/328 (29%), Positives = 166/328 (50%), Gaps = 5/328 (1%)

Query: 3   SLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTNLI 62
           ++ DVAR+AGVS  TVSRV+     V    K +V  A+ + GY+ N VA  L SQ++ +I
Sbjct: 13  TMEDVARVAGVSAMTVSRVLRKPTLVNADLKARVEAAIRETGYIYNLVASSLASQRSGII 72

Query: 63  GVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIVFY 122
            +I+P V+S      V G++ +       +++A T+   A+E + I+   ++R +G V  
Sbjct: 73  ALILPTVASSIFTDSVKGVSDVARTHAVQMIMAETNYSPAEEEKVIEALLRRRPDGFVIV 132

Query: 123 ATHLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEA-GQRLVKAGCKQIGF 181
                +     ++ S VPVV    D +   I S+V   +    +A  + LV  G ++I F
Sbjct: 133 GVSHTRATRALLEKSGVPVVET-WDSTPTPIDSLVGLSNFDAMKAMTEALVAQGFRRIVF 191

Query: 182 IGVQSDDIAVDVLRSQGLQQALGFH--QQTLLFHARGNFSIESGYQMAKQAYLDYPQLDG 239
           +G  + D     +R++G +  +        L+ +A    S+ESG  +A++     P+ D 
Sbjct: 192 VGTATPDRRAQ-MRAKGYEAGIAEAGLGAPLILNAGDLTSMESGRIIAERIAALRPRPDA 250

Query: 240 LFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAGENAA 299
           + C  D LA GA+ A Q +G+ V   + + G G  + +   NP LST +    + G+ AA
Sbjct: 251 VLCLNDVLAAGALLAFQRMGITVPADIAVAGFGGLDFSSHLNPSLSTVDIPRYEMGQKAA 310

Query: 300 KMLLERIAGRGQEMSKVVLTFQNIQRET 327
           +MLL RIAG   +     + ++ + RE+
Sbjct: 311 EMLLGRIAGTAAQGGTCEMGYRIMLRES 338