Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., LacI family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  124 bits (311), Expect = 3e-33
 Identities = 98/336 (29%), Positives = 170/336 (50%), Gaps = 10/336 (2%)

Query: 1   MASLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTN 60
           MA++ DVA LAG+S +TVS V+N    V E  +IKV  A++Q  Y+ + VA+ LK++ T 
Sbjct: 1   MATIKDVAALAGISYTTVSHVVNKTRPVSEPVRIKVEAAIKQLDYVPSAVARSLKAKTTA 60

Query: 61  LIGVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIV 120
            IG++VP   +   A+   G+    E+ G  V+L N+     K+  Y+++  +KR++G++
Sbjct: 61  TIGLLVPNSLNPYFAELARGIEDYCERNGYCVILCNSDDNAEKQRNYLRVLLEKRIDGLI 120

Query: 121 FYATHLDQP-LVHAIQHSAVPVVLVGQDGSLYNIP-SIVHDDHRVG-FEAGQRLVKAGCK 177
             +   D   L   +     P+V+V  D +L  I   +V  DH  G + A + L++ G +
Sbjct: 121 VTSVGGDDSGLAAGLSAVRTPMVIV--DRALDGIDVDLVRIDHEEGAYLATRHLLELGHR 178

Query: 178 QIGFIGVQSDDIAVDVLRSQGLQQALGFHQQTLLFH--ARGNFSIESGYQMAKQAYLDYP 235
            I  IG  +    V  +R  G  +AL     T+  +     +F+   GY  A Q   + P
Sbjct: 179 DIACIGGPA-HTRVAQMRLAGYHRALREAGVTVAANRTQESDFTSTGGYTAAVQLLTENP 237

Query: 236 QLDGLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAG 295
               +F + D +  G ++A  E  + V  ++ ++G  + ++     P L+T   +  + G
Sbjct: 238 P-SAIFASNDMIGFGVLRAAAERNIRVPGELSVIGFDDIQMGRYVYPALTTVGQSIVQLG 296

Query: 296 ENAAKMLLERIAGRGQEMSKVVLTFQNIQRE-TCPV 330
           E AA++LL RIA     + + ++T   + RE T PV
Sbjct: 297 ETAAELLLRRIATPHMPIDQRIVTPSIVLRESTAPV 332