Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Transcriptional regulator, LacI family from Variovorax sp. SCN45

 Score =  124 bits (312), Expect = 3e-33
 Identities = 99/329 (30%), Positives = 158/329 (48%), Gaps = 7/329 (2%)

Query: 3   SLHDVARLAGVSKSTVSRVINDEYG--VKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTN 60
           ++ DVAR AGV  STVSR ++ E    + E     V +A ++ GY  N+ A  L++ +T+
Sbjct: 14  TIRDVARAAGVHVSTVSRALSPEKRSLISEEVLRVVEEAAQRLGYRPNRAASALRTGRTH 73

Query: 61  LIGVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIV 120
            IGV+VP +++      + G+ A     G  V + N     A     ++    +RV+G+V
Sbjct: 74  TIGVLVPDITNAVFPPILQGIEASAAARGYFVFVTNVADP-ALARPVLERMLAQRVDGVV 132

Query: 121 FYATHLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQRLVKAGCKQIG 180
                 D PLV  +  + +  VLV +      +P++V DD      A   LV  G K+I 
Sbjct: 133 MATATRDDPLVDFVAKAGMTAVLVNRADETGRLPAVVSDDRLAMKLAVDHLVALGHKRIA 192

Query: 181 FI-GVQSDDIAVDVLRSQGLQQALGFHQQTLLFHAR-GNFSIESGYQMAKQAYLDYPQLD 238
            + G Q+  I   V R  G++QAL  H+          ++S E+G    KQ         
Sbjct: 193 HLAGPQT--IPTGVGRRLGVEQALRDHRMKPFRVVECASYSREAGALAMKQMLEAGAAPQ 250

Query: 239 GLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAGENA 298
            + C  D +A+GA  AL+E G+ V Q + + G  +  L  + +PPL+T      + G  A
Sbjct: 251 AVVCCNDLVALGAYDALREAGLRVPQDISVTGHNDMPLVDMVDPPLTTIRLPHRELGWRA 310

Query: 299 AKMLLERIAGRGQEMSKVVLTFQNIQRET 327
           A+ML + I GR    S VVL  + + R++
Sbjct: 311 AEMLFDEIDGRSMSASTVVLRPELVVRQS 339