Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

 Score =  130 bits (327), Expect = 5e-35
 Identities = 97/328 (29%), Positives = 166/328 (50%), Gaps = 13/328 (3%)

Query: 1   MASLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTN 60
           MA++ DVA  A VS +TVS V+ND   V    + +V  A+ + GY+ N +A+ LKS  T+
Sbjct: 1   MATIKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTS 60

Query: 61  LIGVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIV 120
            +G+++P  S+   A+ V  +      AG  ++L NT     ++  Y+Q+  ++R++G++
Sbjct: 61  TLGMLIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLI 120

Query: 121 FYATHL--DQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQRLVKAGCKQ 178
              T    D  LV  +    VP VLV ++ +      +     + G  A + L+  G K+
Sbjct: 121 VVLTGTGDDDALVKQLHGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGHKR 180

Query: 179 IGFIGVQSDDIAVDVLRSQGLQQALGFHQQT--------LLFHARGNFSIESGYQMAKQA 230
           I  IG Q+  +     R +G + AL     T        LL+  RG F+ + GY+     
Sbjct: 181 IACIGGQAG-VMPSEQRIEGWRMALAEAGATPDIANGDALLW--RGGFTSQGGYEAMHAI 237

Query: 231 YLDYPQLDGLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYA 290
                +   +F   D +A+GA++A  E GV V   + ++G  + EL+  ++PPL+T    
Sbjct: 238 LRTERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQP 297

Query: 291 FDKAGENAAKMLLERIAGRGQEMSKVVL 318
            ++ G  A  MLLE++ G+ ++  KVVL
Sbjct: 298 KERIGAMAVDMLLEQMGGKRRDARKVVL 325