Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., LacI family DNA-binding transcriptional regulator from Variovorax sp. OAS795

 Score =  109 bits (273), Expect = 8e-29
 Identities = 87/340 (25%), Positives = 155/340 (45%), Gaps = 25/340 (7%)

Query: 6   DVARLAGVSKSTVSRVINDEYG----VKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTNL 61
           DVA   GVSK TVSR +N   G      E+ + ++L+A E+ GY+++Q A+   S+++  
Sbjct: 3   DVAARVGVSKMTVSRALNRSTGSDRATSEALRQRILQACEEMGYVIDQTARTFSSKRSGF 62

Query: 62  IGVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIVF 121
           + V++P +++   ++   G+ A  E  G  +LL  T      E   ++    +R EG++ 
Sbjct: 63  VAVLIPSLNNSNFSETAQGIAAALEARGLQLLLGYTDYRVETEERLVRAMLARRPEGVIL 122

Query: 122 YATHLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQ-------RLVKA 174
                       +Q + +PVV        +++P+    +H VGF   Q        L   
Sbjct: 123 TGGAHTPAARAMLQAAGIPVV------ETWDLPA-TPIEHTVGFSNAQAAAAMVRHLHGQ 175

Query: 175 GCKQIGFIGVQSDDIAVDVLRSQGLQQA---LGFHQQTLLFHARGNFSIESGYQMAKQAY 231
           G ++I FIG  S+       R +G  +A   LG     ++   +   S+  G +   Q  
Sbjct: 176 GYRRIAFIGGTSNRDTRGADRQRGYAEAIRELGLPDGRVISFGQPPISMAQGGEAVVQLI 235

Query: 232 LDYPQLDGLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAF 291
             +P +D + C +D  A GA+   +  G  V  ++ + G G+ E+A  S+P ++T     
Sbjct: 236 RQWPDVDAVMCVSDLSAFGALMECKRRGWDVPGRIAIAGFGDFEVARASHPRITTVAVDC 295

Query: 292 DKAGENAAKMLLERIAGRGQ----EMSKVVLTFQNIQRET 327
              G  A ++LL  I G  +        V++ F+  QRE+
Sbjct: 296 AGIGRAAGELLLRVIDGAREGHRPPAETVLIPFRVEQRES 335