Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., DNA-binding transcriptional regulator CytR from Vibrio cholerae E7946 ATCC 55056

 Score =  133 bits (335), Expect = 5e-36
 Identities = 94/329 (28%), Positives = 166/329 (50%), Gaps = 3/329 (0%)

Query: 1   MASLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTN 60
           MA++ DVA+LAGVS +TVSR + +   V  ST+ +V +AV + GY  N +A++L+  ++ 
Sbjct: 1   MATMKDVAQLAGVSTATVSRALMNPEKVSSSTRKRVEEAVLEAGYSPNSLARNLRRNESK 60

Query: 61  LIGVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIV 120
            I  IVP +     ++ + G+     + G  VLL ++ Q   +E  ++ +   K+ +G++
Sbjct: 61  TIVAIVPDICDPYFSEIIRGIEDAAMEHGYLVLLGDSGQQKRRENSFVNLVFTKQADGML 120

Query: 121 FYATHLDQPLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQRLVKAGCKQIG 180
              T L   +    Q +  P+V+  +      +P++  D+    FEA   L + G K+I 
Sbjct: 121 LLGTDLPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDNLTSAFEAVNYLTQLGHKRIA 180

Query: 181 FIGVQSDDIAVDVLRSQGLQQALGFHQQTL--LFHARGNFSIESGYQMAKQAYLDYPQLD 238
            I       A+   R QG QQAL     T+   +   G+F+ E+G +  +Q      Q  
Sbjct: 181 QIS-GPQHAALCQFRHQGYQQALRRAGITMNPTYCTFGDFTFEAGAKAVRQLLALPEQPT 239

Query: 239 GLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDKAGENA 298
            +FC  D +A+GAI+  + LG+ V Q + ++G  + + A   +PPL+T +    + G  A
Sbjct: 240 AIFCHNDTMAIGAIQEAKRLGLRVPQDLSVVGFDDIQFAQYCDPPLTTISQPRYEIGRQA 299

Query: 299 AKMLLERIAGRGQEMSKVVLTFQNIQRET 327
             M+LE + G        +L  + + RE+
Sbjct: 300 MLMMLELLRGHDVRAGSRLLETKLVVRES 328