Pairwise Alignments

Query, 330 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., LacI family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  131 bits (330), Expect = 2e-35
 Identities = 96/334 (28%), Positives = 170/334 (50%), Gaps = 12/334 (3%)

Query: 1   MASLHDVARLAGVSKSTVSRVINDEYGVKESTKIKVLKAVEQCGYMVNQVAKDLKSQKTN 60
           MA+++DV +LAGVSK+TVSRV+N+   VK  T+  VL A++Q GY  N +A+ L +  TN
Sbjct: 10  MATINDVCKLAGVSKATVSRVLNETGQVKAQTREAVLAAMQQLGYQPNSLAQALATNTTN 69

Query: 61  LIGVIVPRVSSHATAQGVDGLTAIFEQAGKHVLLANTHQVHAKEIEYIQIFNQKRVEGIV 120
            IG+++P   S      +       ++AGK +L+ N+      E E +     +R + I+
Sbjct: 70  SIGLVLPHFESSYFGSILFEAEQGAQKAGKKLLVMNSKNSEQGEKEAVATLAAQRCDAIL 129

Query: 121 FYATHLDQ-PLVHAIQHSAVPVVLVGQDGSLYNIPSIVHDDHRVGFEAGQRLVKAGCKQI 179
            Y+ HL++  L+   Q    P+V++ +      + S   D  ++   A Q L+  G +QI
Sbjct: 130 LYSRHLNEVQLLELQQQHPSPLVILNRRLHHPQLHSFGLDQTQIAQLAMQHLLNLGHRQI 189

Query: 180 GFIGVQSDDIAVDV--LRSQGLQQALGFHQQTLLFHA----RGNFSIESGYQMAKQAYLD 233
             I   +  +  +   +R Q  QQAL  H+Q +   +     G+ ++  GYQ  +Q    
Sbjct: 190 ACI---TSPLVSETGKIRYQVYQQAL--HEQGIELSSSLVIEGDNTLLGGYQAMQQLLQQ 244

Query: 234 YPQLDGLFCATDRLAVGAIKALQELGVHVGQQVKLLGVGNDELAYVSNPPLSTFNYAFDK 293
              +  +F   D +A+GA++A+ E G+HV +QV ++G+ N+  A  + P LS+ +    +
Sbjct: 245 GISMTAVFACNDDMALGAMRAMHEHGIHVPKQVSIIGIDNEPAAAFAIPSLSSVSLPIGE 304

Query: 294 AGENAAKMLLERIAGRGQEMSKVVLTFQNIQRET 327
             + A  + +E    + Q+    +     I RE+
Sbjct: 305 LTQQAISLAVEIANKKPQDAQHRLYQGSLIARES 338